Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11710

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,505,266	+		RR42_RS11700	0.52	+0.5
2,505,266	+		RR42_RS11700	0.52	-0.9
2,505,267	-		RR42_RS11700	0.52	+1.5
2,505,267	-		RR42_RS11700	0.52	+0.6
2,505,267	-		RR42_RS11700	0.52	-0.3
2,505,277	+		RR42_RS11700	0.54	+0.2
2,505,277	+		RR42_RS11700	0.54	-2.2
2,505,278	-		RR42_RS11700	0.54	+0.1
2,505,696	+		RR42_RS11705	0.17	+1.5
2,505,774	+		RR42_RS11705	0.39	+0.1
2,505,774	+		RR42_RS11705	0.39	-1.5
2,505,774	+		RR42_RS11705	0.39	-0.1
2,505,774	+		RR42_RS11705	0.39	-1.5
2,505,775	-		RR42_RS11705	0.39	-0.2
2,505,775	-		RR42_RS11705	0.39	-1.3
2,506,180	+				-0.6
2,506,180	+				+2.7
2,506,458	+				-0.9
2,506,459	-				+0.3
2,506,459	-				+0.2
2,506,659	+				+1.6
2,506,660	-				-1.1
2,506,660	-				+0.6
2,506,960	+				+0.6
2,506,961	-				+1.1
2,506,961	-				-0.3
2,506,967	-				-1.3
2,507,126	-				-0.3
2,507,126	-				-0.9
2,507,129	+				+0.1
2,507,130	-				+0.6
2,507,130	-				-0.5
2,507,147	-				+1.1
2,507,148	+				+0.5
2,507,148	+				-0.2
2,507,148	+				-0.8
2,507,148	+				+0.8
2,507,149	-				+1.7
2,507,198	+				+0.8
2,507,198	+				+0.3
2,507,220	+				-1.5
2,507,240	-				+0.3
2,507,346	+		RR42_RS11715	0.25	+0.7
2,507,367	+		RR42_RS11715	0.29	-1.1