Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11520

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,462,365	+		RR42_RS11515	0.11	+1.6
2,462,366	-		RR42_RS11515	0.11	-0.6
2,462,366	-		RR42_RS11515	0.11	-0.5
2,462,425	+		RR42_RS11515	0.17	-0.4
2,462,425	+		RR42_RS11515	0.17	+0.9
2,462,426	-		RR42_RS11515	0.17	-2.7
2,462,426	-		RR42_RS11515	0.17	+1.0
2,462,426	-		RR42_RS11515	0.17	+0.8
2,462,489	+		RR42_RS11515	0.23	-0.8
2,462,491	+		RR42_RS11515	0.24	-0.6
2,462,491	+		RR42_RS11515	0.24	-0.5
2,462,491	+		RR42_RS11515	0.24	+0.4
2,462,492	-		RR42_RS11515	0.24	+0.5
2,462,492	-		RR42_RS11515	0.24	-0.2
2,462,492	-		RR42_RS11515	0.24	-0.9
2,462,492	-		RR42_RS11515	0.24	-0.0
2,462,699	+		RR42_RS11515	0.44	+0.7
2,462,767	+		RR42_RS11515	0.51	+0.0
2,462,767	+		RR42_RS11515	0.51	-0.3
2,462,767	+		RR42_RS11515	0.51	-1.3
2,462,768	-		RR42_RS11515	0.51	-0.8
2,462,768	-		RR42_RS11515	0.51	+0.8
2,462,768	-		RR42_RS11515	0.51	-0.5
2,462,768	-		RR42_RS11515	0.51	-0.2
2,462,893	+		RR42_RS11515	0.63	+2.0
2,463,019	+		RR42_RS11515	0.76	+0.1
2,463,019	+		RR42_RS11515	0.76	-0.4
2,463,019	+		RR42_RS11515	0.76	-0.8
2,463,109	+		RR42_RS11515	0.85	+0.0
2,463,110	-		RR42_RS11515	0.85	-0.5
2,463,835	+		RR42_RS11520	0.73	-1.1
2,463,836	-		RR42_RS11520	0.73	-1.0
2,464,124	+				+1.3
2,464,152	-		RR42_RS11525	0.10	-1.5
2,464,202	+		RR42_RS11525	0.15	-0.6
2,464,203	-		RR42_RS11525	0.16	-0.9
2,464,733	+		RR42_RS11525	0.69	+0.6
2,464,764	-		RR42_RS11525	0.72	-0.8
2,464,890	+		RR42_RS11525	0.85	-0.9
2,464,890	+		RR42_RS11525	0.85	+1.5