Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10980

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,344,545	+		RR42_RS10975	0.32	+0.6
2,344,554	+		RR42_RS10975	0.33	-0.3
2,344,671	+		RR42_RS10975	0.41	+0.5
2,344,821	-		RR42_RS10975	0.53	-0.4
2,344,917	+		RR42_RS10975	0.60	-1.7
2,344,918	-		RR42_RS10975	0.60	-0.0
2,344,918	-		RR42_RS10975	0.60	-1.5
2,344,942	-		RR42_RS10975	0.62	-0.1
2,345,162	+		RR42_RS10975	0.78	+0.2
2,345,162	+		RR42_RS10975	0.78	-0.1
2,345,162	+		RR42_RS10975	0.78	-0.3
2,345,162	+		RR42_RS10975	0.78	+1.5
2,345,325	+				+0.4
2,345,325	+				+0.3
2,345,325	+				-0.6
2,345,325	+				-0.2
2,345,326	-				-0.3
2,345,326	-				-0.2
2,345,326	-				+1.2
2,345,326	-				-0.8
2,345,326	-				-2.3
2,345,337	+				-0.3
2,345,338	-				-0.6
2,345,376	+				+0.6
2,345,376	+				-0.8
2,345,376	+				+0.5
2,345,377	-				-0.8
2,345,377	-				-1.3
2,345,377	-				+0.6
2,345,377	-				+1.3
2,345,377	-				+0.3
2,345,377	-				+0.4
2,345,377	-				-0.8
2,345,377	-				-0.3
2,345,525	+				-0.2
2,345,526	-				+0.5
2,345,526	-				+1.6
2,345,526	-				-0.4
2,345,591	+		RR42_RS10980	0.13	-0.8
2,345,768	+		RR42_RS10980	0.35	+0.9
2,345,855	+		RR42_RS10980	0.46	-1.1
2,345,948	+		RR42_RS10980	0.58	+1.2
2,346,029	+		RR42_RS10980	0.69	+1.2
2,346,152	+		RR42_RS10980	0.84	+0.4
2,346,159	-		RR42_RS10980	0.85	+1.7
2,346,261	-				-1.6
2,346,382	+				-1.3
2,346,382	+				-0.3
2,346,382	+				-1.4
2,346,382	+				+0.7
2,346,383	-				-1.8
2,346,383	-				-0.3
2,346,385	+				+0.4
2,346,386	-				+1.0
2,346,386	-				+1.0
2,346,720	+		RR42_RS10985	0.40	+0.2
2,346,721	-		RR42_RS10985	0.40	-0.1
2,346,822	+		RR42_RS10985	0.50	-0.0
2,347,187	+		RR42_RS10985	0.87	-0.6
2,347,188	-		RR42_RS10985	0.87	+0.4