Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10440

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,232,218	+		RR42_RS10435	0.13	-1.1
2,232,218	+		RR42_RS10435	0.13	+0.5
2,232,235	-		RR42_RS10435	0.17	+0.6
2,232,235	-		RR42_RS10435	0.17	+1.5
2,232,235	-		RR42_RS10435	0.17	-1.7
2,232,235	-		RR42_RS10435	0.17	+1.7
2,232,268	+		RR42_RS10435	0.26	+0.0
2,232,268	+		RR42_RS10435	0.26	-0.1
2,232,269	-		RR42_RS10435	0.26	+0.3
2,232,357	+		RR42_RS10435	0.49	-0.7
2,232,374	+		RR42_RS10435	0.53	+0.6
2,232,374	+		RR42_RS10435	0.53	+0.7
2,232,374	+		RR42_RS10435	0.53	+0.9
2,232,375	-		RR42_RS10435	0.54	+0.3
2,232,572	+				+0.4
2,232,573	-				-0.1
2,232,573	-				-1.8
2,232,573	-				+0.3
2,232,667	-				+0.7
2,232,789	+				-0.5
2,232,793	+				+0.7
2,232,793	+				-0.1
2,232,793	+				+0.1
2,232,793	+				-1.2
2,232,794	-				+0.8
2,232,794	-				-1.5
2,233,011	+				+0.6
2,233,093	+				-2.2
2,233,123	+				+1.9
2,233,313	+		RR42_RS10440	0.25	+0.2
2,233,313	+		RR42_RS10440	0.25	+0.5
2,233,313	+		RR42_RS10440	0.25	+1.1
2,233,719	+		RR42_RS10445	0.19	-0.8
2,233,719	+		RR42_RS10445	0.19	-0.3
2,233,793	-		RR42_RS10445	0.36	+2.1
2,233,872	+		RR42_RS10445	0.54	-1.5
2,233,873	-		RR42_RS10445	0.54	-0.6
2,234,081	+				-0.2
2,234,082	-				-2.0
2,234,200	+				-0.7
2,234,206	-				+1.9
2,234,274	+				-0.9