Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10105

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,161,665	+		RR42_RS10095	0.85	-1.8
2,161,666	-		RR42_RS10095	0.85	+0.2
2,161,720	+				-1.1
2,161,758	+				+1.9
2,161,758	+				-0.2
2,161,758	+				+0.6
2,161,758	+				+1.6
2,161,759	-				-1.1
2,161,759	-				+0.1
2,161,759	-				-2.4
2,161,759	-				-1.9
2,162,005	+		RR42_RS10100	0.23	-0.5
2,162,006	-		RR42_RS10100	0.23	-1.9
2,162,054	-		RR42_RS10100	0.29	-0.9
2,162,055	+		RR42_RS10100	0.29	-0.6
2,162,055	+		RR42_RS10100	0.29	+0.1
2,162,056	-		RR42_RS10100	0.29	-1.3
2,162,161	+		RR42_RS10100	0.42	-0.1
2,162,161	+		RR42_RS10100	0.42	+0.3
2,162,161	+		RR42_RS10100	0.42	-1.9
2,162,161	+		RR42_RS10100	0.42	+0.7
2,162,162	-		RR42_RS10100	0.42	+0.3
2,162,162	-		RR42_RS10100	0.42	-0.7
2,162,162	-		RR42_RS10100	0.42	-0.4
2,162,162	-		RR42_RS10100	0.42	-2.2
2,162,391	-		RR42_RS10100	0.70	+1.9
2,162,553	+		RR42_RS10100	0.90	+0.3
2,162,554	-				+0.1
2,162,607	-				+1.4
2,162,607	-				+0.2
2,162,733	+		RR42_RS10105	0.12	-2.6
2,162,734	-		RR42_RS10105	0.12	-1.6
2,162,976	+		RR42_RS10105	0.41	-0.4
2,162,977	-		RR42_RS10105	0.42	+0.9
2,163,041	+		RR42_RS10105	0.49	-0.9
2,163,426	+				-0.3
2,163,659	+		RR42_RS10110	0.23	+1.2
2,163,662	+		RR42_RS10110	0.24	-0.3
2,163,663	-		RR42_RS10110	0.24	+2.3
2,163,976	-		RR42_RS10110	0.60	-1.2
2,163,976	-		RR42_RS10110	0.60	+1.6
2,164,047	-		RR42_RS10110	0.68	+0.9
2,164,047	-		RR42_RS10110	0.68	+0.6
2,164,047	-		RR42_RS10110	0.68	-0.1
2,164,112	+		RR42_RS10110	0.76	+0.9
2,164,164	-		RR42_RS10110	0.82	+0.2
2,164,320	+				-1.3
2,164,320	+				+0.6
2,164,321	-				+0.7
2,164,321	-				-0.5
2,164,321	-				-1.0
2,164,321	-				-2.3
2,164,411	+				-1.8
2,164,411	+				+0.1
2,164,411	+				+0.2
2,164,412	-				+0.7
2,164,412	-				-1.0
2,164,444	+				+0.1
2,164,445	-				-1.1
2,164,450	-				-1.1