Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09975

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,128,221	-		RR42_RS09970	0.41	-0.7
2,128,377	+		RR42_RS09970	0.52	+0.1
2,128,378	-		RR42_RS09970	0.52	-0.1
2,128,426	-		RR42_RS09970	0.55	+1.4
2,128,443	+		RR42_RS09970	0.57	+0.7
2,128,443	+		RR42_RS09970	0.57	-0.6
2,128,444	-		RR42_RS09970	0.57	-0.1
2,128,444	-		RR42_RS09970	0.57	-0.8
2,128,444	-		RR42_RS09970	0.57	-0.3
2,128,500	+		RR42_RS09970	0.61	-1.0
2,128,501	-		RR42_RS09970	0.61	-0.6
2,128,696	+		RR42_RS09970	0.75	-1.0
2,128,697	-		RR42_RS09970	0.75	-0.1
2,128,743	+		RR42_RS09970	0.78	+0.4
2,128,793	+		RR42_RS09970	0.82	-0.8
2,128,794	-		RR42_RS09970	0.82	-0.2
2,128,960	+				-1.6
2,128,960	+				+0.4
2,128,986	-				+0.8
2,129,138	+				-0.2
2,129,138	+				-0.0
2,129,205	-		RR42_RS09975	0.16	-0.6
2,129,329	+		RR42_RS09975	0.42	-0.9
2,129,330	-		RR42_RS09975	0.42	-0.7
2,129,364	-		RR42_RS09975	0.49	-0.8
2,129,373	+		RR42_RS09975	0.51	+1.2
2,129,524	+		RR42_RS09975	0.83	-0.0
2,129,525	-		RR42_RS09975	0.84	-0.9
2,129,525	-		RR42_RS09975	0.84	-1.0
2,129,622	+				-0.0
2,129,623	-				+1.5
2,129,713	+				+0.6
2,129,713	+				-0.7
2,129,713	+				-0.4
2,129,766	+				-0.4
2,129,766	+				-0.7
2,129,924	+				-0.6
2,129,924	+				-0.6
2,129,924	+				+0.3
2,129,925	-				-0.1
2,129,925	-				+1.4
2,129,925	-				+0.1
2,129,974	-				-0.3
2,130,077	+		RR42_RS09980	0.12	-0.2
2,130,077	+		RR42_RS09980	0.12	-0.2
2,130,311	+		RR42_RS09980	0.19	-0.0
2,130,380	-		RR42_RS09980	0.21	-0.9
2,130,414	+		RR42_RS09980	0.22	+0.6
2,130,414	+		RR42_RS09980	0.22	+0.7
2,130,457	-		RR42_RS09980	0.24	-0.2
2,130,464	+		RR42_RS09980	0.24	-0.3
2,130,465	-		RR42_RS09980	0.24	+0.2
2,130,507	+		RR42_RS09980	0.25	+0.7
2,130,507	+		RR42_RS09980	0.25	+0.2
2,130,507	+		RR42_RS09980	0.25	-2.2
2,130,507	+		RR42_RS09980	0.25	+0.3
2,130,507	+		RR42_RS09980	0.25	-1.1
2,130,508	-		RR42_RS09980	0.25	+0.5
2,130,508	-		RR42_RS09980	0.25	+0.3
2,130,508	-		RR42_RS09980	0.25	+0.0
2,130,546	+		RR42_RS09980	0.26	+1.2
2,130,547	-		RR42_RS09980	0.26	+0.1