Experiment: R2A with Paraquat dichloride 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS09665 and RR42_RS09670 are separated by 717 nucleotides
RR42_RS09665: RR42_RS09665 - hypothetical protein, at 2,050,327 to 2,052,003
_RS09665
RR42_RS09670: RR42_RS09670 - hypothetical protein, at 2,052,721 to 2,053,122
_RS09670
Position (kb)
2052
2053
2054 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2052.204 kb on - strand at 2052.383 kb on + strand at 2052.390 kb on - strand at 2052.456 kb on - strand at 2052.456 kb on - strand at 2052.513 kb on - strand at 2052.719 kb on + strand at 2052.722 kb on + strand at 2052.723 kb on - strand at 2052.792 kb on + strand, within RR42_RS09670 at 2052.793 kb on - strand, within RR42_RS09670 at 2052.793 kb on - strand, within RR42_RS09670 at 2052.793 kb on - strand, within RR42_RS09670 at 2052.793 kb on - strand, within RR42_RS09670 at 2052.861 kb on + strand, within RR42_RS09670 at 2052.862 kb on - strand, within RR42_RS09670 at 2052.923 kb on - strand, within RR42_RS09670 at 2052.966 kb on + strand, within RR42_RS09670 at 2052.973 kb on - strand, within RR42_RS09670 at 2053.101 kb on + strand at 2053.102 kb on - strand at 2053.103 kb on + strand at 2053.103 kb on + strand at 2053.103 kb on + strand at 2053.104 kb on - strand at 2053.104 kb on - strand at 2053.192 kb on + strand at 2053.192 kb on + strand at 2053.193 kb on - strand at 2053.193 kb on - strand at 2053.194 kb on + strand at 2053.243 kb on + strand at 2053.244 kb on - strand at 2053.274 kb on + strand at 2053.275 kb on - strand at 2053.325 kb on + strand at 2053.326 kb on - strand at 2053.384 kb on - strand at 2053.384 kb on - strand at 2053.481 kb on + strand at 2053.482 kb on - strand at 2053.482 kb on - strand at 2053.517 kb on - strand at 2053.565 kb on + strand at 2053.565 kb on + strand at 2053.566 kb on - strand at 2053.566 kb on - strand at 2053.676 kb on - strand at 2053.676 kb on - strand at 2053.756 kb on - strand at 2053.859 kb on + strand at 2053.860 kb on - strand at 2053.860 kb on - strand at 2053.912 kb on + strand at 2053.967 kb on + strand at 2053.972 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Paraquat dichloride 0.064 mg/ml remove 2,052,204 - -1.5 2,052,383 + +0.8 2,052,390 - -0.8 2,052,456 - -0.3 2,052,456 - +0.9 2,052,513 - +0.9 2,052,719 + -0.2 2,052,722 + +0.2 2,052,723 - -0.5 2,052,792 + RR42_RS09670 0.18 +0.9 2,052,793 - RR42_RS09670 0.18 +1.4 2,052,793 - RR42_RS09670 0.18 +0.4 2,052,793 - RR42_RS09670 0.18 +1.2 2,052,793 - RR42_RS09670 0.18 +1.4 2,052,861 + RR42_RS09670 0.35 +0.4 2,052,862 - RR42_RS09670 0.35 -0.8 2,052,923 - RR42_RS09670 0.50 -0.3 2,052,966 + RR42_RS09670 0.61 +0.2 2,052,973 - RR42_RS09670 0.63 -0.4 2,053,101 + +0.3 2,053,102 - -0.9 2,053,103 + +0.0 2,053,103 + -1.1 2,053,103 + -0.5 2,053,104 - -0.2 2,053,104 - +0.1 2,053,192 + -0.6 2,053,192 + +0.7 2,053,193 - +0.5 2,053,193 - +0.8 2,053,194 + -0.4 2,053,243 + -0.3 2,053,244 - -1.4 2,053,274 + +0.3 2,053,275 - +0.2 2,053,325 + -0.0 2,053,326 - -0.4 2,053,384 - -0.1 2,053,384 - +0.4 2,053,481 + +0.0 2,053,482 - -2.1 2,053,482 - -0.4 2,053,517 - +0.7 2,053,565 + -0.1 2,053,565 + +1.2 2,053,566 - +1.9 2,053,566 - +0.7 2,053,676 - +0.7 2,053,676 - -1.5 2,053,756 - -1.6 2,053,859 + +0.1 2,053,860 - -0.8 2,053,860 - -0.1 2,053,912 + +0.3 2,053,967 + -0.3 2,053,972 - -2.1
Or see this region's nucleotide sequence