Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09045

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,900,360	+				-0.2
1,900,470	+				-1.1
1,900,470	+				-0.8
1,900,471	-				-1.1
1,900,607	+				-1.8
1,900,607	+				+1.1
1,900,607	+				+0.4
1,900,626	+				-0.4
1,900,627	-				+1.5
1,900,653	+				-0.2
1,900,696	+				+0.7
1,900,896	-		RR42_RS09040	0.27	+1.0
1,901,092	-				-0.3
1,901,093	+				+0.5
1,901,093	+				+1.0
1,901,094	-				+0.2
1,901,094	-				-0.4
1,901,094	-				+0.4
1,901,152	-				-0.6
1,901,152	-				-1.4
1,901,152	-				-0.0
1,901,293	+				-1.5
1,901,293	+				-1.4
1,901,346	+				-0.6
1,901,419	+		RR42_RS09045	0.11	-1.8
1,901,617	+		RR42_RS09045	0.21	-1.0
1,901,617	+		RR42_RS09045	0.21	-1.3
1,901,617	+		RR42_RS09045	0.21	-0.4
1,901,618	-		RR42_RS09045	0.21	-2.8
1,901,854	+		RR42_RS09045	0.34	-0.5
1,901,854	+		RR42_RS09045	0.34	+0.4
1,901,855	-		RR42_RS09045	0.34	+1.5
1,901,855	-		RR42_RS09045	0.34	-0.6
1,901,857	+		RR42_RS09045	0.34	-0.0
1,901,908	+		RR42_RS09045	0.36	-1.5
1,902,245	-		RR42_RS09045	0.54	-0.9
1,902,289	+		RR42_RS09045	0.56	+0.2
1,902,403	+		RR42_RS09045	0.62	-0.0
1,902,432	+		RR42_RS09045	0.63	+0.3
1,902,433	-		RR42_RS09045	0.63	-1.9
1,902,439	+		RR42_RS09045	0.64	-0.4
1,902,440	-		RR42_RS09045	0.64	-1.8
1,902,440	-		RR42_RS09045	0.64	-0.8
1,902,440	-		RR42_RS09045	0.64	+0.2
1,902,724	+		RR42_RS09045	0.78	-2.1
1,902,724	+		RR42_RS09045	0.78	-0.4
1,902,725	-		RR42_RS09045	0.78	-0.8
1,902,725	-		RR42_RS09045	0.78	-0.4
1,902,726	+		RR42_RS09045	0.78	+0.4
1,902,727	-		RR42_RS09045	0.78	+2.0
1,902,727	-		RR42_RS09045	0.78	+1.0
1,902,910	+		RR42_RS09045	0.88	-1.2
1,902,910	+		RR42_RS09045	0.88	-2.9
1,902,910	+		RR42_RS09045	0.88	-1.6
1,902,910	+		RR42_RS09045	0.88	+1.0
1,902,910	+		RR42_RS09045	0.88	-1.3
1,902,911	-		RR42_RS09045	0.88	-1.8
1,902,940	+		RR42_RS09045	0.89	-2.0
1,902,949	+		RR42_RS09045	0.90	-1.6
1,902,950	-		RR42_RS09045	0.90	+0.0
1,903,058	-				-0.8
1,903,058	-				-1.6
1,903,058	-				-1.5
1,903,058	-				-0.4
1,903,058	-				-2.4
1,903,058	-				-0.6
1,903,223	+				-0.0
1,903,223	+				-0.6
1,903,224	-				+0.4
1,903,224	-				-1.8
1,903,231	-				-0.5
1,903,416	-		RR42_RS09050	0.28	-1.6
1,903,452	-		RR42_RS09050	0.33	-1.5
1,903,683	+		RR42_RS09050	0.66	-0.0
1,903,683	+		RR42_RS09050	0.66	+0.8
1,903,684	-		RR42_RS09050	0.66	-1.1
1,903,684	-		RR42_RS09050	0.66	-0.3