Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08360

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,767,551	+		RR42_RS08355	0.25	+0.3
1,767,608	+		RR42_RS08355	0.33	+0.0
1,767,608	+		RR42_RS08355	0.33	-0.5
1,767,644	+		RR42_RS08355	0.39	+0.6
1,767,645	-		RR42_RS08355	0.39	-1.0
1,767,695	+		RR42_RS08355	0.47	-1.0
1,767,696	-		RR42_RS08355	0.47	-1.2
1,767,776	+		RR42_RS08355	0.60	-0.1
1,767,864	-		RR42_RS08355	0.73	+1.0
1,767,998	+				+1.1
1,768,168	+				+1.4
1,768,169	-				-1.0
1,768,451	+				-1.1
1,768,451	+				+0.5
1,768,452	-				-0.0
1,768,547	+		RR42_RS08360	0.27	-0.4
1,768,547	+		RR42_RS08360	0.27	-0.0
1,768,550	+		RR42_RS08360	0.27	+1.2
1,768,551	-		RR42_RS08360	0.28	+4.1
1,768,556	+		RR42_RS08360	0.28	-1.2
1,768,562	+		RR42_RS08360	0.30	-2.3
1,768,676	+		RR42_RS08360	0.50	-0.4
1,768,792	+		RR42_RS08360	0.71	+0.7
1,769,020	+				-0.6
1,769,047	-				+1.0
1,769,089	+				-1.1
1,769,090	-				+1.3
1,769,090	-				-1.3
1,769,129	+				-0.1
1,769,138	+				+2.0
1,769,326	+				+0.2
1,769,327	-				-0.4
1,769,463	-				-0.5
1,769,463	-				-0.1
1,769,463	-				+0.4
1,769,736	+		RR42_RS08365	0.45	+0.0
1,769,796	-		RR42_RS08365	0.52	-1.8
1,769,796	-		RR42_RS08365	0.52	-0.6
1,769,915	+		RR42_RS08365	0.68	+0.2
1,769,916	-		RR42_RS08365	0.68	-1.1
1,769,916	-		RR42_RS08365	0.68	+0.1