Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07530

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,608,610	+				+1.1
1,608,618	+				-1.6
1,608,618	+				-1.0
1,608,619	-				-0.8
1,608,619	-				-0.5
1,608,710	+		RR42_RS07525	0.19	-1.6
1,608,710	+		RR42_RS07525	0.19	-1.4
1,608,770	+		RR42_RS07525	0.26	-1.1
1,608,770	+		RR42_RS07525	0.26	-0.4
1,609,126	+		RR42_RS07525	0.69	-0.5
1,609,127	-		RR42_RS07525	0.69	+0.5
1,609,282	+		RR42_RS07525	0.88	+0.1
1,609,357	-				+2.1
1,609,367	-				+0.4
1,609,569	+				+0.7
1,609,652	+		RR42_RS07530	0.10	-0.4
1,609,653	-		RR42_RS07530	0.10	-1.3
1,609,664	+		RR42_RS07530	0.11	+0.3
1,609,664	+		RR42_RS07530	0.11	-1.5
1,609,665	-		RR42_RS07530	0.12	-1.2
1,609,665	-		RR42_RS07530	0.12	+0.4
1,609,665	-		RR42_RS07530	0.12	+0.6
1,609,665	-		RR42_RS07530	0.12	-1.3
1,609,665	-		RR42_RS07530	0.12	-0.5
1,609,706	+		RR42_RS07530	0.15	+1.3
1,609,706	+		RR42_RS07530	0.15	-1.0
1,609,707	-		RR42_RS07530	0.15	-0.1
1,609,752	-		RR42_RS07530	0.19	+0.5
1,609,961	-		RR42_RS07530	0.37	+2.1
1,609,961	-		RR42_RS07530	0.37	+0.4
1,610,061	-		RR42_RS07530	0.45	+0.7
1,610,061	-		RR42_RS07530	0.45	-0.1
1,610,291	+		RR42_RS07530	0.64	+1.2
1,610,292	-		RR42_RS07530	0.65	-0.6
1,610,292	-		RR42_RS07530	0.65	-0.4
1,610,369	+		RR42_RS07530	0.71	+0.8
1,610,429	+		RR42_RS07530	0.76	-0.4
1,610,450	+		RR42_RS07530	0.78	-0.7
1,610,450	+		RR42_RS07530	0.78	+0.6
1,610,450	+		RR42_RS07530	0.78	+0.5
1,610,450	+		RR42_RS07530	0.78	-0.9
1,610,466	-		RR42_RS07530	0.79	-1.1
1,610,716	+				+0.3
1,610,856	+				-0.7
1,610,856	+				-0.2
1,610,856	+				-0.3
1,610,866	+				-0.3
1,610,953	+		RR42_RS07535	0.15	-0.4
1,610,953	+		RR42_RS07535	0.15	-1.0
1,610,953	+		RR42_RS07535	0.15	+0.2
1,610,953	+		RR42_RS07535	0.15	-1.4
1,610,953	+		RR42_RS07535	0.15	-0.2
1,610,953	+		RR42_RS07535	0.15	-1.4
1,610,954	-		RR42_RS07535	0.15	+0.4
1,610,954	-		RR42_RS07535	0.15	+0.2
1,611,079	+		RR42_RS07535	0.30	-0.7
1,611,080	-		RR42_RS07535	0.30	+1.3
1,611,080	-		RR42_RS07535	0.30	+0.0
1,611,080	-		RR42_RS07535	0.30	-0.6
1,611,080	-		RR42_RS07535	0.30	-0.5
1,611,085	+		RR42_RS07535	0.30	+0.5
1,611,086	-		RR42_RS07535	0.31	+0.3
1,611,121	+		RR42_RS07535	0.35	-0.3
1,611,122	-		RR42_RS07535	0.35	-0.2
1,611,176	+		RR42_RS07535	0.41	-0.3
1,611,176	+		RR42_RS07535	0.41	+0.8
1,611,176	+		RR42_RS07535	0.41	-0.9
1,611,176	+		RR42_RS07535	0.41	+2.1
1,611,176	+		RR42_RS07535	0.41	-0.1
1,611,177	-		RR42_RS07535	0.41	+0.0
1,611,177	-		RR42_RS07535	0.41	+0.9
1,611,177	-		RR42_RS07535	0.41	-1.5
1,611,239	-		RR42_RS07535	0.48	+1.6
1,611,248	-		RR42_RS07535	0.49	-0.5
1,611,295	+		RR42_RS07535	0.55	+1.1
1,611,296	-		RR42_RS07535	0.55	+0.2
1,611,296	-		RR42_RS07535	0.55	+0.7
1,611,394	+		RR42_RS07535	0.66	-1.1
1,611,583	-		RR42_RS07535	0.88	+0.2
1,611,629	-				-1.5
1,611,704	-				+1.5