Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07345

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,566,161	+		RR42_RS07340	0.61	+0.9
1,566,162	-		RR42_RS07340	0.61	-0.9
1,566,162	-		RR42_RS07340	0.61	-1.1
1,566,200	-		RR42_RS07340	0.63	-0.0
1,566,241	+		RR42_RS07340	0.64	-0.4
1,566,241	+		RR42_RS07340	0.64	+0.6
1,566,242	-		RR42_RS07340	0.64	-1.5
1,566,242	-		RR42_RS07340	0.64	+1.0
1,566,242	-		RR42_RS07340	0.64	-1.5
1,566,242	-		RR42_RS07340	0.64	-0.7
1,566,275	-		RR42_RS07340	0.66	-0.2
1,566,275	-		RR42_RS07340	0.66	-0.9
1,566,292	+		RR42_RS07340	0.67	+0.8
1,566,293	-		RR42_RS07340	0.67	+0.5
1,566,419	-		RR42_RS07340	0.73	-0.8
1,566,419	-		RR42_RS07340	0.73	-0.7
1,566,619	+		RR42_RS07340	0.82	+0.4
1,566,620	-		RR42_RS07340	0.82	-0.3
1,566,620	-		RR42_RS07340	0.82	-0.5
1,566,620	-		RR42_RS07340	0.82	-0.4
1,566,620	-		RR42_RS07340	0.82	-0.3
1,566,628	+		RR42_RS07340	0.83	+0.8
1,566,628	+		RR42_RS07340	0.83	+0.3
1,566,628	+		RR42_RS07340	0.83	-2.1
1,566,713	+		RR42_RS07340	0.87	-2.3
1,567,016	+				-0.3
1,568,016	-				+1.1
1,568,016	-				-0.7
1,568,016	-				-0.7
1,568,016	-				+1.7
1,568,017	+				-0.3
1,568,017	+				+0.1
1,568,018	-				-1.5
1,568,018	-				-0.1
1,568,050	-				-0.7
1,568,060	+				-0.0
1,568,060	+				-1.2
1,568,061	-				-2.0
1,568,071	+				-0.4
1,568,092	+				-0.5
1,568,093	-				+1.3
1,568,093	-				+0.9
1,568,093	-				+1.2
1,568,093	-				-0.2
1,568,241	+		RR42_RS07350	0.23	-1.1
1,568,241	+		RR42_RS07350	0.23	-1.5
1,568,436	-		RR42_RS07350	0.52	-2.1
1,568,600	+		RR42_RS07350	0.76	-1.0
1,568,600	+		RR42_RS07350	0.76	-0.6
1,568,600	+		RR42_RS07350	0.76	-2.0
1,568,601	-		RR42_RS07350	0.76	-1.3
1,568,601	-		RR42_RS07350	0.76	+0.4
1,568,636	-		RR42_RS07350	0.81	-1.7
1,568,711	+				-2.5
1,568,711	+				-0.9
1,568,711	+				-1.0
1,568,712	-				-0.7
1,568,712	-				-1.0