Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07295

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,554,909	+				+0.8
1,554,909	+				-0.7
1,554,910	-				-2.3
1,554,944	+				+0.8
1,554,944	+				+0.1
1,554,945	-				-1.1
1,554,977	+				+0.8
1,554,977	+				-0.2
1,554,977	+				+0.1
1,554,978	-				+0.4
1,554,978	-				-2.3
1,554,978	-				-0.3
1,554,978	-				-0.9
1,555,008	+				-0.9
1,555,008	+				+2.1
1,555,009	-				+0.4
1,555,009	-				-0.5
1,555,009	-				-0.2
1,555,009	-				-0.4
1,555,009	-				-2.2
1,555,014	+				+0.2
1,555,015	-				-0.6
1,555,015	-				-0.9
1,555,192	-				+0.3
1,555,192	-				-0.5
1,555,203	+				-0.1
1,555,203	+				+0.5
1,555,204	-				-0.5
1,555,204	-				+0.5
1,555,420	+				+0.0
1,555,420	+				+1.3
1,555,446	-				-0.5
1,555,461	-				+0.3
1,555,461	-				-0.0
1,555,461	-				-2.3
1,555,464	+				-0.8
1,555,465	-				+2.1
1,555,465	-				-0.6
1,555,465	-				+1.5
1,555,509	-				-0.5
1,555,670	+				-0.4
1,555,688	+				-1.2
1,556,201	-		RR42_RS07295	0.43	-2.0
1,556,247	-		RR42_RS07295	0.48	-0.2
1,556,247	-		RR42_RS07295	0.48	-1.4
1,556,795	+				-0.6
1,556,795	+				-0.6
1,556,795	+				-2.1
1,556,795	+				-0.5
1,556,796	-				+0.2
1,556,796	-				-0.5
1,556,796	-				+0.5
1,556,874	+				-0.3
1,557,088	+		RR42_RS07300	0.16	+1.5
1,557,088	+		RR42_RS07300	0.16	-0.7
1,557,088	+		RR42_RS07300	0.16	+0.1
1,557,088	+		RR42_RS07300	0.16	+2.1
1,557,089	-		RR42_RS07300	0.17	-0.4
1,557,089	-		RR42_RS07300	0.17	-0.6
1,557,147	+		RR42_RS07300	0.21	+0.3
1,557,148	-		RR42_RS07300	0.21	-0.8
1,557,157	+		RR42_RS07300	0.21	-0.5
1,557,157	+		RR42_RS07300	0.21	+1.1
1,557,157	+		RR42_RS07300	0.21	+1.1
1,557,157	+		RR42_RS07300	0.21	-0.8
1,557,158	-		RR42_RS07300	0.22	-0.3
1,557,158	-		RR42_RS07300	0.22	+1.0
1,557,159	+		RR42_RS07300	0.22	-1.0
1,557,159	+		RR42_RS07300	0.22	-2.5
1,557,159	+		RR42_RS07300	0.22	-1.5
1,557,159	+		RR42_RS07300	0.22	+0.6
1,557,159	+		RR42_RS07300	0.22	+0.3
1,557,159	+		RR42_RS07300	0.22	-0.7
1,557,159	+		RR42_RS07300	0.22	-0.0
1,557,160	-		RR42_RS07300	0.22	+0.1
1,557,160	-		RR42_RS07300	0.22	+0.3
1,557,160	-		RR42_RS07300	0.22	+0.5
1,557,160	-		RR42_RS07300	0.22	+1.1
1,557,160	-		RR42_RS07300	0.22	+1.1
1,557,160	-		RR42_RS07300	0.22	+0.2
1,557,160	-		RR42_RS07300	0.22	+0.3
1,557,243	+		RR42_RS07300	0.28	-0.7
1,557,243	+		RR42_RS07300	0.28	+0.1
1,557,243	+		RR42_RS07300	0.28	-1.2
1,557,243	+		RR42_RS07300	0.28	+0.4
1,557,244	-		RR42_RS07300	0.28	-0.3
1,557,262	+		RR42_RS07300	0.29	-0.5
1,557,262	+		RR42_RS07300	0.29	-0.3
1,557,262	+		RR42_RS07300	0.29	-0.7
1,557,262	+		RR42_RS07300	0.29	+1.0
1,557,263	-		RR42_RS07300	0.29	-0.0
1,557,263	-		RR42_RS07300	0.29	-1.7
1,557,263	-		RR42_RS07300	0.29	+1.1
1,557,263	-		RR42_RS07300	0.29	-1.1
1,557,269	-		RR42_RS07300	0.30	-1.4
1,557,446	-		RR42_RS07300	0.42	+1.1
1,557,553	+		RR42_RS07300	0.50	-0.3
1,557,554	-		RR42_RS07300	0.50	+0.1
1,557,554	-		RR42_RS07300	0.50	-1.0
1,557,605	-		RR42_RS07300	0.54	-1.0
1,557,640	+		RR42_RS07300	0.56	+10.2
1,557,711	+		RR42_RS07300	0.61	+1.3
1,557,711	+		RR42_RS07300	0.61	-0.3