Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06775

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,467,442	+				-0.1
1,467,442	+				-1.0
1,467,442	+				+1.2
1,467,443	-				-0.4
1,467,455	-				+0.0
1,467,497	+				-0.0
1,467,498	-				+0.2
1,467,503	+				-0.6
1,467,512	-				-0.6
1,467,649	+				-1.7
1,467,649	+				+0.2
1,467,649	+				-0.3
1,467,649	+				-0.1
1,467,650	-				-1.6
1,467,651	+				-1.2
1,467,651	+				-2.4
1,467,652	-				-0.6
1,467,652	-				-0.4
1,467,698	+				+0.4
1,467,698	+				-1.1
1,467,699	-				+0.9
1,467,853	+		RR42_RS06765	0.46	+1.2
1,467,854	-		RR42_RS06765	0.46	+2.2
1,468,148	+				-0.8
1,468,149	-				-0.1
1,468,150	+				-1.5
1,468,152	+				-2.0
1,468,152	+				-0.3
1,468,152	+				-0.7
1,468,153	-				+0.4
1,468,153	-				-0.2
1,468,164	+				+1.2
1,468,246	+				-0.3
1,468,248	+		RR42_RS06770	0.11	+1.2
1,468,441	+				+0.3
1,468,441	+				+1.9
1,468,441	+				-2.1
1,468,442	-				+0.8
1,468,454	+				+0.5
1,468,455	-				+0.4
1,468,535	+		RR42_RS06775	0.17	+0.0
1,468,538	-		RR42_RS06775	0.18	-1.7
1,468,557	+		RR42_RS06775	0.21	+0.5
1,468,558	-		RR42_RS06775	0.21	+1.6
1,468,558	-		RR42_RS06775	0.21	+1.5
1,468,708	+		RR42_RS06775	0.49	+0.8
1,468,865	+		RR42_RS06775	0.77	-1.1
1,468,865	+		RR42_RS06775	0.77	-0.2
1,468,896	+		RR42_RS06775	0.83	+3.2
1,468,896	+		RR42_RS06775	0.83	+1.1
1,468,897	-		RR42_RS06775	0.83	+2.4
1,469,068	-				+0.4
1,469,184	-		RR42_RS06780	0.15	+0.1
1,469,287	+		RR42_RS06780	0.23	+1.0
1,469,288	-		RR42_RS06780	0.23	+0.4
1,469,288	-		RR42_RS06780	0.23	-0.3
1,469,288	-		RR42_RS06780	0.23	+1.8
1,469,354	-		RR42_RS06780	0.28	-0.1
1,469,710	-		RR42_RS06780	0.55	-0.1
1,469,830	-		RR42_RS06780	0.64	+0.4
1,469,830	-		RR42_RS06780	0.64	-0.6
1,469,830	-		RR42_RS06780	0.64	-0.3
1,469,907	+		RR42_RS06780	0.70	-0.3
1,469,982	-		RR42_RS06780	0.76	-0.8