Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06410

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,403,667	+		RR42_RS06400	0.64	+0.4
1,403,667	+		RR42_RS06400	0.64	-0.8
1,403,667	+		RR42_RS06400	0.64	-0.9
1,403,667	+		RR42_RS06400	0.64	+0.2
1,403,668	-		RR42_RS06400	0.64	-1.4
1,403,668	-		RR42_RS06400	0.64	+1.5
1,403,668	-		RR42_RS06400	0.64	+2.2
1,403,710	-		RR42_RS06400	0.67	-1.1
1,403,770	-		RR42_RS06400	0.71	-2.3
1,403,836	-		RR42_RS06400	0.75	-0.6
1,403,934	+		RR42_RS06400	0.81	-0.5
1,403,935	-		RR42_RS06400	0.81	+0.6
1,404,003	+		RR42_RS06400	0.85	-0.0
1,404,003	+		RR42_RS06400	0.85	-0.0
1,404,003	+		RR42_RS06400	0.85	-0.8
1,404,003	+		RR42_RS06400	0.85	-1.0
1,404,004	-		RR42_RS06400	0.85	-0.5
1,404,004	-		RR42_RS06400	0.85	-0.5
1,404,004	-		RR42_RS06400	0.85	-0.1
1,404,004	-		RR42_RS06400	0.85	-1.5
1,404,060	+		RR42_RS06400	0.88	+0.2
1,404,061	-		RR42_RS06400	0.88	+2.2
1,404,314	+		RR42_RS06405	0.18	+0.4
1,404,314	+		RR42_RS06405	0.18	+0.6
1,404,315	-		RR42_RS06405	0.19	-0.0
1,404,440	+		RR42_RS06405	0.53	+2.1
1,404,441	-		RR42_RS06405	0.53	+0.1
1,404,449	+		RR42_RS06405	0.56	-0.8
1,404,502	+		RR42_RS06405	0.70	-0.9
1,404,725	-				+0.2
1,404,762	+				-0.8
1,404,763	-				+0.0
1,404,763	-				-0.3
1,404,826	-		RR42_RS06410	0.14	+0.1
1,404,826	-		RR42_RS06410	0.14	+0.5
1,405,368	+		RR42_RS06410	0.58	-0.5
1,405,369	-		RR42_RS06410	0.58	+1.2
1,405,378	-		RR42_RS06410	0.59	-1.1
1,405,517	+		RR42_RS06410	0.70	+0.9
1,405,517	+		RR42_RS06410	0.70	-0.2
1,405,518	-		RR42_RS06410	0.70	-0.1
1,405,518	-		RR42_RS06410	0.70	-0.6
1,405,537	-		RR42_RS06410	0.72	-0.5
1,405,565	+		RR42_RS06410	0.74	+0.2
1,405,572	+		RR42_RS06410	0.75	-0.6
1,405,572	+		RR42_RS06410	0.75	-1.8
1,405,573	-		RR42_RS06410	0.75	-1.1
1,405,778	+				+0.7
1,405,778	+				-1.9
1,405,779	-				+0.7
1,405,779	-				-0.8
1,406,240	+		RR42_RS06415	0.73	+2.2
1,406,240	+		RR42_RS06415	0.73	-0.3
1,406,240	+		RR42_RS06415	0.73	-0.7
1,406,386	+				+1.9
1,406,387	-				-0.3
1,406,395	-				+0.7
1,406,517	+				-0.8
1,406,518	-				-0.3
1,406,551	+				+0.2
1,406,559	+				-0.4
1,406,560	-				+0.0
1,406,560	-				+1.0
1,406,560	-				+0.3
1,406,560	-				-0.3
1,406,560	-				-1.9
1,406,574	-				+0.5
1,406,682	-				-1.3
1,406,742	+				-1.0
1,406,742	+				+0.2
1,406,742	+				-0.1
1,406,742	+				-2.5
1,406,742	+				+2.2
1,406,743	-				-1.1
1,406,835	+		RR42_RS06420	0.18	-0.2
1,406,836	-		RR42_RS06420	0.19	+0.6