Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06270

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,373,674	+		RR42_RS06260	0.46	-0.8
1,373,674	+		RR42_RS06260	0.46	-0.4
1,373,675	-		RR42_RS06260	0.46	-2.4
1,373,717	+		RR42_RS06260	0.51	+0.4
1,373,717	+		RR42_RS06260	0.51	-0.0
1,373,718	-		RR42_RS06260	0.51	+1.4
1,373,718	-		RR42_RS06260	0.51	+1.4
1,373,718	-		RR42_RS06260	0.51	+1.3
1,373,773	+		RR42_RS06260	0.58	+1.8
1,373,774	-		RR42_RS06260	0.58	+2.2
1,373,774	-		RR42_RS06260	0.58	-1.1
1,373,821	-		RR42_RS06260	0.64	-0.8
1,373,860	+		RR42_RS06260	0.69	-1.4
1,373,991	+		RR42_RS06260	0.86	-0.3
1,374,140	+				-0.0
1,374,147	+				-0.0
1,374,148	-				-0.4
1,374,477	+				-0.3
1,374,512	+				-0.8
1,374,546	+				-1.7
1,374,553	+				+0.1
1,374,596	+				-0.5
1,374,632	+				-0.7
1,374,636	-				-0.8
1,374,798	-		RR42_RS06270	0.15	+0.4
1,374,814	-		RR42_RS06270	0.16	+0.5
1,374,814	-		RR42_RS06270	0.16	+0.3
1,374,833	+		RR42_RS06270	0.18	+0.1
1,374,891	-		RR42_RS06270	0.23	+1.7
1,374,982	-		RR42_RS06270	0.31	+0.5
1,375,223	+		RR42_RS06270	0.52	+0.2
1,375,238	+		RR42_RS06270	0.54	+0.3
1,375,238	+		RR42_RS06270	0.54	+1.2
1,375,239	-		RR42_RS06270	0.54	+0.9
1,375,239	-		RR42_RS06270	0.54	+0.6
1,375,430	+		RR42_RS06270	0.71	-0.1
1,375,430	+		RR42_RS06270	0.71	+1.2
1,375,431	-		RR42_RS06270	0.71	+2.5
1,375,431	-		RR42_RS06270	0.71	+1.3
1,375,734	+				-1.0
1,375,824	-				-1.1
1,375,824	-				+1.3
1,375,824	-				-0.4
1,375,825	+				-0.1
1,375,826	-				+0.1
1,375,890	+				+0.2
1,375,890	+				+0.6
1,375,890	+				+0.2
1,375,890	+				+2.2
1,375,891	-				-0.7
1,375,891	-				+0.2
1,375,948	-		RR42_RS06275	0.18	+0.6
1,375,948	-		RR42_RS06275	0.18	-0.8
1,375,948	-		RR42_RS06275	0.18	-0.8
1,376,061	+		RR42_RS06275	0.39	-0.3
1,376,062	-		RR42_RS06275	0.39	-0.9
1,376,083	+		RR42_RS06275	0.43	+0.2
1,376,083	+		RR42_RS06275	0.43	-1.9
1,376,175	+		RR42_RS06275	0.60	+0.8
1,376,176	-		RR42_RS06275	0.60	-1.0
1,376,176	-		RR42_RS06275	0.60	+2.2
1,376,176	-		RR42_RS06275	0.60	-0.0
1,376,176	-		RR42_RS06275	0.60	-1.1
1,376,428	+				-0.1
1,376,485	-				-0.8
1,376,485	-				-0.6
1,376,559	+				+0.3