Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06140

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,348,847	+		RR42_RS06135	0.44	+0.0
1,348,848	-		RR42_RS06135	0.44	-0.4
1,348,897	-		RR42_RS06135	0.47	+0.6
1,348,934	+		RR42_RS06135	0.49	+0.4
1,348,934	+		RR42_RS06135	0.49	-0.9
1,348,935	-		RR42_RS06135	0.50	+0.2
1,348,935	-		RR42_RS06135	0.50	+0.2
1,348,935	-		RR42_RS06135	0.50	+0.3
1,349,013	+		RR42_RS06135	0.55	-0.1
1,349,030	+		RR42_RS06135	0.56	+1.2
1,349,030	+		RR42_RS06135	0.56	-0.8
1,349,031	-		RR42_RS06135	0.56	+1.8
1,349,072	+		RR42_RS06135	0.59	-0.0
1,349,073	-		RR42_RS06135	0.59	+0.2
1,349,222	+		RR42_RS06135	0.69	-0.7
1,349,228	+		RR42_RS06135	0.69	-0.3
1,349,228	+		RR42_RS06135	0.69	+0.4
1,349,229	-		RR42_RS06135	0.70	-0.2
1,349,252	+		RR42_RS06135	0.71	-0.4
1,349,252	+		RR42_RS06135	0.71	+1.0
1,349,291	+		RR42_RS06135	0.74	+0.1
1,349,291	+		RR42_RS06135	0.74	+0.6
1,349,291	+		RR42_RS06135	0.74	+1.1
1,349,291	+		RR42_RS06135	0.74	-0.9
1,349,291	+		RR42_RS06135	0.74	-1.1
1,349,292	-		RR42_RS06135	0.74	-0.6
1,349,292	-		RR42_RS06135	0.74	+0.3
1,349,292	-		RR42_RS06135	0.74	+0.1
1,349,292	-		RR42_RS06135	0.74	-0.7
1,349,292	-		RR42_RS06135	0.74	+0.1
1,349,292	-		RR42_RS06135	0.74	-1.2
1,349,292	-		RR42_RS06135	0.74	-0.2
1,349,321	+		RR42_RS06135	0.76	-0.1
1,349,321	+		RR42_RS06135	0.76	-0.7
1,349,321	+		RR42_RS06135	0.76	+1.0
1,349,322	-		RR42_RS06135	0.76	-0.8
1,349,322	-		RR42_RS06135	0.76	-0.1
1,349,322	-		RR42_RS06135	0.76	+0.2
1,349,322	-		RR42_RS06135	0.76	+0.1
1,349,322	-		RR42_RS06135	0.76	+0.4
1,349,460	-		RR42_RS06135	0.85	-0.3
1,349,502	-		RR42_RS06135	0.88	+0.9
1,349,697	+				+0.2
1,349,697	+				-0.3
1,349,698	-				-0.1
1,349,698	-				+1.0
1,349,779	-				-1.1
1,349,815	+				+1.2
1,349,860	+				-0.0
1,349,926	-		RR42_RS06140	0.16	+1.9
1,349,926	-		RR42_RS06140	0.16	-0.1
1,349,960	-		RR42_RS06140	0.20	-0.8
1,350,415	+		RR42_RS06140	0.67	+0.1
1,350,415	+		RR42_RS06140	0.67	-1.2
1,350,415	+		RR42_RS06140	0.67	-0.1
1,350,416	-		RR42_RS06140	0.67	+2.2
1,350,428	-		RR42_RS06140	0.69	-0.9
1,350,428	-		RR42_RS06140	0.69	-0.6
1,350,428	-		RR42_RS06140	0.69	-0.9
1,350,601	+		RR42_RS06140	0.87	-0.4
1,350,602	-		RR42_RS06140	0.87	-1.2
1,350,643	+				+0.0
1,350,643	+				+1.0
1,350,644	-				-0.0
1,350,729	+				+0.4
1,350,729	+				-0.9
1,350,733	-				+0.0
1,350,769	+				-0.1
1,350,770	-				+0.4
1,350,793	+				+0.6
1,350,793	+				+0.3
1,350,794	-				-1.2
1,350,794	-				+0.0
1,350,799	+				+0.5
1,350,930	+		RR42_RS06145	0.20	+0.2
1,350,931	-		RR42_RS06145	0.20	+0.9
1,350,931	-		RR42_RS06145	0.20	-0.9
1,350,966	+		RR42_RS06145	0.25	-0.3
1,351,079	-		RR42_RS06145	0.38	+0.7
1,351,081	+		RR42_RS06145	0.39	-0.6
1,351,142	-		RR42_RS06145	0.46	+0.0
1,351,348	+		RR42_RS06145	0.71	-0.9
1,351,498	+		RR42_RS06145	0.89	-0.5
1,351,498	+		RR42_RS06145	0.89	+1.0
1,351,499	-		RR42_RS06145	0.89	-1.5
1,351,499	-		RR42_RS06145	0.89	+0.6
1,351,655	-				+0.5
1,351,655	-				+0.0
1,351,716	+				+0.2
1,351,717	-				-0.7
1,351,717	-				+0.3