Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05695

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,251,821	+		RR42_RS05690	0.12	+0.1
1,251,821	+		RR42_RS05690	0.12	-0.6
1,251,821	+		RR42_RS05690	0.12	+0.2
1,251,862	-		RR42_RS05690	0.18	+0.3
1,251,887	+		RR42_RS05690	0.22	+0.0
1,251,891	+		RR42_RS05690	0.23	+0.7
1,251,892	-		RR42_RS05690	0.23	-1.0
1,251,892	-		RR42_RS05690	0.23	-0.4
1,251,892	-		RR42_RS05690	0.23	+1.2
1,252,128	+		RR42_RS05690	0.60	-0.4
1,252,129	-		RR42_RS05690	0.61	+1.3
1,252,129	-		RR42_RS05690	0.61	-2.1
1,252,129	-		RR42_RS05690	0.61	-0.4
1,252,230	+		RR42_RS05690	0.77	-1.5
1,252,230	+		RR42_RS05690	0.77	-0.9
1,252,230	+		RR42_RS05690	0.77	-1.1
1,252,231	-		RR42_RS05690	0.77	+1.9
1,252,495	+				-0.2
1,252,670	-				-0.5
1,253,084	-		RR42_RS05695	0.29	+0.1
1,253,264	-		RR42_RS05695	0.47	+1.3
1,253,264	-		RR42_RS05695	0.47	-0.7
1,253,422	+		RR42_RS05695	0.62	+0.6
1,253,542	+		RR42_RS05695	0.74	+0.3
1,253,542	+		RR42_RS05695	0.74	+1.7
1,253,543	-		RR42_RS05695	0.74	+0.2
1,253,548	+		RR42_RS05695	0.75	+0.1
1,253,548	+		RR42_RS05695	0.75	+1.3
1,253,548	+		RR42_RS05695	0.75	+0.0
1,253,548	+		RR42_RS05695	0.75	+0.5
1,253,549	-		RR42_RS05695	0.75	-0.7
1,253,549	-		RR42_RS05695	0.75	-0.3
1,253,549	-		RR42_RS05695	0.75	+2.6
1,253,604	-		RR42_RS05695	0.80	+0.0
1,253,897	+		RR42_RS05700	0.21	+0.7
1,254,050	+		RR42_RS05700	0.60	-0.7
1,254,050	+		RR42_RS05700	0.60	-0.5
1,254,050	+		RR42_RS05700	0.60	+0.6
1,254,050	+		RR42_RS05700	0.60	+2.3
1,254,051	-		RR42_RS05700	0.60	-1.3
1,254,051	-		RR42_RS05700	0.60	-1.6
1,254,097	+		RR42_RS05700	0.72	+0.2
1,254,097	+		RR42_RS05700	0.72	-0.1
1,254,214	+				+1.0
1,254,214	+				-0.7
1,254,214	+				+0.3
1,254,240	-				-0.8
1,254,287	-				-0.1
1,254,287	-				-0.7
1,254,287	-				+0.6
1,254,356	+				-1.0
1,254,356	+				-0.5
1,254,356	+				-1.2
1,254,357	-				+0.9
1,254,357	-				+0.9
1,254,439	+				+0.9
1,254,458	+				-0.4
1,254,459	-				-0.3
1,254,459	-				-0.3
1,254,461	+				+0.5
1,254,461	+				+0.7
1,254,462	-				+0.7
1,254,555	+				-0.1
1,254,555	+				-0.7
1,254,555	+				-1.0
1,254,556	-				+0.3
1,254,592	-				+1.7
1,254,602	+				+0.7
1,254,626	+				+0.5
1,254,627	-				-1.2
1,254,709	+		RR42_RS05705	0.12	+0.0
1,254,709	+		RR42_RS05705	0.12	-0.2
1,254,709	+		RR42_RS05705	0.12	-0.8
1,254,710	-		RR42_RS05705	0.12	+0.4
1,254,710	-		RR42_RS05705	0.12	-0.1
1,254,710	-		RR42_RS05705	0.12	-0.3
1,254,753	+		RR42_RS05705	0.17	+1.4
1,254,753	+		RR42_RS05705	0.17	+0.7
1,254,753	+		RR42_RS05705	0.17	-0.9
1,254,753	+		RR42_RS05705	0.17	+0.0
1,254,754	-		RR42_RS05705	0.17	+1.7
1,254,754	-		RR42_RS05705	0.17	+0.7
1,254,754	-		RR42_RS05705	0.17	-0.1