Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05290

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
1,167,092	-		RR42_RS05285	0.62	-1.5
1,167,331	+		RR42_RS05285	0.76	-1.0
1,167,331	+		RR42_RS05285	0.76	-0.8
1,167,332	-		RR42_RS05285	0.76	-1.2
1,167,370	+		RR42_RS05285	0.78	+0.7
1,167,381	-		RR42_RS05285	0.78	-1.4
1,167,382	+		RR42_RS05285	0.78	-1.1
1,167,383	-		RR42_RS05285	0.79	+1.5
1,167,853	+				-1.3
1,167,853	+				-1.2
1,167,854	-				+0.1
1,167,854	-				-0.6
1,167,854	-				-1.9
1,167,855	+				-0.5
1,167,856	-				-1.6
1,167,856	-				+3.3
1,168,000	+				-0.8
1,168,000	+				-0.8
1,168,005	+				+0.4
1,168,079	+				-0.0
1,168,079	+				+1.0
1,168,079	+				-0.6
1,168,080	-				-1.8
1,168,129	-				+0.2
1,168,447	+		RR42_RS05290	0.59	-0.9
1,168,572	+		RR42_RS05290	0.79	-1.1
1,168,700	-				+0.3
1,168,700	-				+1.5
1,168,700	-				+0.3
1,168,759	+				+1.0
1,168,759	+				+0.5
1,168,760	-				+0.3
1,168,760	-				-0.5
1,168,760	-				+0.5
1,168,868	+				-0.9
1,168,869	-				+0.1
1,168,890	+				-0.6
1,168,891	-				+1.9
1,168,965	+		RR42_RS05295	0.11	-0.5
1,168,966	-		RR42_RS05295	0.11	+2.0
1,168,966	-		RR42_RS05295	0.11	+0.3
1,169,088	-		RR42_RS05295	0.23	-0.6
1,169,250	+		RR42_RS05295	0.39	-0.2
1,169,250	+		RR42_RS05295	0.39	-0.5
1,169,250	+		RR42_RS05295	0.39	-0.5
1,169,251	-		RR42_RS05295	0.39	-0.7
1,169,251	-		RR42_RS05295	0.39	+1.5
1,169,251	-		RR42_RS05295	0.39	+0.1
1,169,532	+		RR42_RS05295	0.67	-1.5
1,169,632	+		RR42_RS05295	0.77	-2.0
1,169,668	-		RR42_RS05295	0.80	-1.1