Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS00440

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
113,773	-				-1.1
113,862	+				+1.6
113,863	-				+1.4
113,863	-				+0.2
113,917	+				+0.6
113,966	+				+2.1
113,966	+				-0.5
113,966	+				+0.4
114,050	+		RR42_RS00435	0.12	+0.2
114,051	-		RR42_RS00435	0.12	-0.2
114,261	+		RR42_RS00435	0.42	-0.2
114,261	+		RR42_RS00435	0.42	-0.5
114,261	+		RR42_RS00435	0.42	+2.1
114,262	-		RR42_RS00435	0.42	+0.6
114,262	-		RR42_RS00435	0.42	-0.3
114,372	+		RR42_RS00435	0.58	-0.1
114,372	+		RR42_RS00435	0.58	+0.3
114,372	+		RR42_RS00435	0.58	+0.3
114,372	+		RR42_RS00435	0.58	+3.2
114,552	-		RR42_RS00435	0.84	-0.0
114,557	+		RR42_RS00435	0.84	-0.1
114,557	+		RR42_RS00435	0.84	-0.8
114,557	+		RR42_RS00435	0.84	+0.8
114,557	+		RR42_RS00435	0.84	-0.4
114,557	+		RR42_RS00435	0.84	-1.3
114,557	+		RR42_RS00435	0.84	+0.2
114,557	+		RR42_RS00435	0.84	-0.3
114,557	+		RR42_RS00435	0.84	-2.1
114,557	+		RR42_RS00435	0.84	+0.3
114,558	-		RR42_RS00435	0.85	-0.6
114,558	-		RR42_RS00435	0.85	+1.1
114,558	-		RR42_RS00435	0.85	+0.6
114,558	-		RR42_RS00435	0.85	+0.2
114,558	-		RR42_RS00435	0.85	+1.4
114,558	-		RR42_RS00435	0.85	+2.0
114,558	-		RR42_RS00435	0.85	+1.6
114,558	-		RR42_RS00435	0.85	-1.5
114,621	+				-0.5
115,004	+		RR42_RS00440	0.33	-0.8
115,084	-		RR42_RS00440	0.43	-2.3
115,699	-				+0.2
115,699	-				+0.2
115,699	-				+0.1
115,699	-				-0.0
115,819	-		RR42_RS00445	0.19	+1.3
115,819	-		RR42_RS00445	0.19	-2.0
115,858	-		RR42_RS00445	0.23	-0.1
115,858	-		RR42_RS00445	0.23	-0.2
115,858	-		RR42_RS00445	0.23	+0.1
115,858	-		RR42_RS00445	0.23	+0.4
115,989	+		RR42_RS00445	0.35	+0.3
115,989	+		RR42_RS00445	0.35	-0.4
115,990	-		RR42_RS00445	0.35	+0.2
116,001	-		RR42_RS00445	0.36	+0.2
116,001	-		RR42_RS00445	0.36	-0.3
116,022	+		RR42_RS00445	0.38	+0.8
116,022	+		RR42_RS00445	0.38	-0.6
116,022	+		RR42_RS00445	0.38	+1.3
116,023	-		RR42_RS00445	0.38	-1.1
116,023	-		RR42_RS00445	0.38	-1.1
116,083	-		RR42_RS00445	0.43	-0.5
116,113	+		RR42_RS00445	0.46	+0.2
116,113	+		RR42_RS00445	0.46	+0.1
116,113	+		RR42_RS00445	0.46	-0.6
116,114	-		RR42_RS00445	0.46	-0.0
116,114	-		RR42_RS00445	0.46	+0.6
116,114	-		RR42_RS00445	0.46	+0.9
116,115	+		RR42_RS00445	0.46	-0.2
116,116	-		RR42_RS00445	0.46	+0.3
116,137	-		RR42_RS00445	0.48	-1.5
116,193	+		RR42_RS00445	0.54	+0.1
116,193	+		RR42_RS00445	0.54	-0.2
116,194	-		RR42_RS00445	0.54	-2.3
116,194	-		RR42_RS00445	0.54	-1.8
116,194	-		RR42_RS00445	0.54	+0.4
116,194	-		RR42_RS00445	0.54	+0.3
116,232	+		RR42_RS00445	0.57	-0.0
116,232	+		RR42_RS00445	0.57	-0.3
116,233	-		RR42_RS00445	0.57	-0.1
116,292	+		RR42_RS00445	0.63	+0.9
116,292	+		RR42_RS00445	0.63	-0.3
116,293	-		RR42_RS00445	0.63	+2.1
116,297	-		RR42_RS00445	0.63	-0.7
116,297	-		RR42_RS00445	0.63	-0.2
116,297	-		RR42_RS00445	0.63	+1.1
116,297	-		RR42_RS00445	0.63	-0.2
116,297	-		RR42_RS00445	0.63	+1.1
116,346	+		RR42_RS00445	0.68	+0.9
116,394	+		RR42_RS00445	0.72	-0.3
116,394	+		RR42_RS00445	0.72	+0.1
116,394	+		RR42_RS00445	0.72	+0.3
116,394	+		RR42_RS00445	0.72	+1.6
116,394	+		RR42_RS00445	0.72	+0.5
116,394	+		RR42_RS00445	0.72	+0.0
116,394	+		RR42_RS00445	0.72	-0.8
116,394	+		RR42_RS00445	0.72	+0.4
116,395	-		RR42_RS00445	0.72	-0.7
116,395	-		RR42_RS00445	0.72	+0.2
116,395	-		RR42_RS00445	0.72	+0.0
116,395	-		RR42_RS00445	0.72	+1.5
116,395	-		RR42_RS00445	0.72	-0.4
116,395	-		RR42_RS00445	0.72	-3.5
116,395	-		RR42_RS00445	0.72	+1.4
116,395	-		RR42_RS00445	0.72	+0.5
116,451	+		RR42_RS00445	0.77	+0.2
116,451	+		RR42_RS00445	0.77	+0.1