Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS00305

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
86,166	+		RR42_RS00300	0.11	-0.2
86,166	+		RR42_RS00300	0.11	+0.0
86,167	-		RR42_RS00300	0.11	+1.5
86,167	-		RR42_RS00300	0.11	-1.2
86,167	-		RR42_RS00300	0.11	+1.6
86,746	-		RR42_RS00300	0.79	+0.2
86,769	+		RR42_RS00300	0.82	-0.7
86,769	+		RR42_RS00300	0.82	+0.5
87,022	+				-0.3
87,023	-				+0.4
87,023	-				-0.0
87,023	-				+0.1
87,023	-				+0.6
87,143	+		RR42_RS00305	0.12	+1.1
87,144	-		RR42_RS00305	0.13	+0.5
87,232	+		RR42_RS00305	0.21	-2.8
87,232	+		RR42_RS00305	0.21	+0.1
87,310	+		RR42_RS00305	0.28	+0.5
87,311	-		RR42_RS00305	0.28	-1.5
87,379	+		RR42_RS00305	0.34	+0.3
87,379	+		RR42_RS00305	0.34	+1.1
87,380	-		RR42_RS00305	0.35	+1.3
87,380	-		RR42_RS00305	0.35	+0.2
87,380	-		RR42_RS00305	0.35	-0.9
87,380	-		RR42_RS00305	0.35	-0.2
87,380	-		RR42_RS00305	0.35	+0.2
87,422	-		RR42_RS00305	0.38	-1.4
87,440	-		RR42_RS00305	0.40	-0.9
87,482	+		RR42_RS00305	0.44	-1.8
87,482	+		RR42_RS00305	0.44	-0.0
87,483	-		RR42_RS00305	0.44	+0.8
87,644	-		RR42_RS00305	0.59	+0.3
87,703	+		RR42_RS00305	0.65	-0.2
87,703	+		RR42_RS00305	0.65	+0.2
87,703	+		RR42_RS00305	0.65	+0.7
87,704	-		RR42_RS00305	0.65	+0.5
87,712	+		RR42_RS00305	0.65	+0.7
87,751	+		RR42_RS00305	0.69	-0.8
87,752	-		RR42_RS00305	0.69	-0.4
87,752	-		RR42_RS00305	0.69	+0.1
87,752	-		RR42_RS00305	0.69	-0.1
87,791	+		RR42_RS00305	0.73	-1.5
87,792	-		RR42_RS00305	0.73	-1.2
87,811	+		RR42_RS00305	0.75	-0.2
87,818	-		RR42_RS00305	0.75	-1.2
87,818	-		RR42_RS00305	0.75	-0.5
87,888	-		RR42_RS00305	0.82	-0.6
87,928	+		RR42_RS00305	0.86	-0.7
87,955	+		RR42_RS00305	0.88	-0.9
87,956	-		RR42_RS00305	0.88	+0.1
88,060	-				-0.5
88,060	-				-0.1
88,232	+				+0.6
88,233	-				-2.0
88,355	+		RR42_RS00310	0.20	-0.4
88,356	-		RR42_RS00310	0.20	+0.2
88,356	-		RR42_RS00310	0.20	+0.6
88,457	+		RR42_RS00310	0.35	-0.1
88,457	+		RR42_RS00310	0.35	-0.5
88,457	+		RR42_RS00310	0.35	-2.0
88,491	-		RR42_RS00310	0.41	-0.4
88,491	-		RR42_RS00310	0.41	+0.8
88,491	-		RR42_RS00310	0.41	-0.3
88,704	-		RR42_RS00310	0.72	+1.3
88,704	-		RR42_RS00310	0.72	-1.9
88,704	-		RR42_RS00310	0.72	+0.5
88,704	-		RR42_RS00310	0.72	-2.0
88,916	-				-1.5
88,925	-				-0.1
88,933	+				+1.2
88,933	+				+0.6
88,933	+				+0.6
88,934	-				-0.8
88,934	-				-0.2
88,935	+				-0.3
88,935	+				+1.2
88,935	+				+1.1
88,936	-				+0.1
88,936	-				-0.1