Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_5009 and Psyr_5010 are separated by 42 nucleotides Psyr_5010 and Psyr_5011 overlap by 4 nucleotides
Psyr_5009: Psyr_5009 - conserved hypothetical protein, at 5,941,892 to 5,942,668
_5009
Psyr_5010: Psyr_5010 - conserved hypothetical protein, at 5,942,711 to 5,943,658
_5010
Psyr_5011: Psyr_5011 - Amino acid adenylation:Thioester reductase, at 5,943,655 to 5,947,101
_5011
Position (kb) 5942
5943
5944 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5941.802 kb on - strand at 5941.805 kb on - strand at 5941.977 kb on + strand, within Psyr_5009 at 5941.977 kb on + strand, within Psyr_5009 at 5941.991 kb on - strand, within Psyr_5009 at 5942.004 kb on + strand, within Psyr_5009 at 5942.004 kb on + strand, within Psyr_5009 at 5942.005 kb on - strand, within Psyr_5009 at 5942.005 kb on - strand, within Psyr_5009 at 5942.165 kb on + strand, within Psyr_5009 at 5942.165 kb on + strand, within Psyr_5009 at 5942.166 kb on - strand, within Psyr_5009 at 5942.166 kb on - strand, within Psyr_5009 at 5942.183 kb on + strand, within Psyr_5009 at 5942.183 kb on + strand, within Psyr_5009 at 5942.183 kb on + strand, within Psyr_5009 at 5942.184 kb on - strand, within Psyr_5009 at 5942.265 kb on - strand, within Psyr_5009 at 5942.468 kb on + strand, within Psyr_5009 at 5942.468 kb on + strand, within Psyr_5009 at 5942.469 kb on - strand, within Psyr_5009 at 5942.469 kb on - strand, within Psyr_5009 at 5942.573 kb on + strand, within Psyr_5009 at 5942.573 kb on + strand, within Psyr_5009 at 5942.573 kb on + strand, within Psyr_5009 at 5942.573 kb on + strand, within Psyr_5009 at 5942.696 kb on + strand at 5942.696 kb on + strand at 5942.696 kb on + strand at 5942.696 kb on + strand at 5942.696 kb on + strand at 5942.696 kb on + strand at 5942.697 kb on - strand at 5942.697 kb on - strand at 5942.697 kb on - strand at 5942.726 kb on + strand at 5942.726 kb on + strand at 5942.726 kb on + strand at 5942.726 kb on + strand at 5942.726 kb on + strand at 5942.726 kb on + strand at 5942.726 kb on + strand at 5942.726 kb on + strand at 5942.726 kb on + strand at 5942.726 kb on + strand at 5942.726 kb on + strand at 5942.726 kb on + strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.727 kb on - strand at 5942.813 kb on + strand, within Psyr_5010 at 5942.813 kb on + strand, within Psyr_5010 at 5942.813 kb on + strand, within Psyr_5010 at 5942.814 kb on - strand, within Psyr_5010 at 5942.839 kb on - strand, within Psyr_5010 at 5942.903 kb on + strand, within Psyr_5010 at 5942.903 kb on + strand, within Psyr_5010 at 5942.903 kb on + strand, within Psyr_5010 at 5942.904 kb on - strand, within Psyr_5010 at 5943.012 kb on - strand, within Psyr_5010 at 5943.012 kb on - strand, within Psyr_5010 at 5943.098 kb on - strand, within Psyr_5010 at 5943.098 kb on - strand, within Psyr_5010 at 5943.098 kb on - strand, within Psyr_5010 at 5943.098 kb on - strand, within Psyr_5010 at 5943.098 kb on - strand, within Psyr_5010 at 5943.098 kb on - strand, within Psyr_5010 at 5943.098 kb on - strand, within Psyr_5010 at 5943.098 kb on - strand, within Psyr_5010 at 5943.350 kb on + strand, within Psyr_5010 at 5943.350 kb on + strand, within Psyr_5010 at 5943.350 kb on + strand, within Psyr_5010 at 5943.350 kb on + strand, within Psyr_5010 at 5943.350 kb on + strand, within Psyr_5010 at 5943.350 kb on + strand, within Psyr_5010 at 5943.351 kb on - strand, within Psyr_5010 at 5943.351 kb on - strand, within Psyr_5010 at 5943.351 kb on - strand, within Psyr_5010 at 5943.351 kb on - strand, within Psyr_5010 at 5943.351 kb on - strand, within Psyr_5010 at 5943.351 kb on - strand, within Psyr_5010 at 5943.351 kb on - strand, within Psyr_5010 at 5943.351 kb on - strand, within Psyr_5010 at 5943.351 kb on - strand, within Psyr_5010 at 5943.351 kb on - strand, within Psyr_5010 at 5943.419 kb on + strand, within Psyr_5010 at 5943.420 kb on - strand, within Psyr_5010 at 5943.629 kb on + strand at 5943.711 kb on + strand at 5943.969 kb on + strand at 5943.969 kb on + strand at 5943.969 kb on + strand at 5943.969 kb on + strand at 5943.969 kb on + strand at 5943.969 kb on + strand at 5943.970 kb on - strand at 5943.970 kb on - strand at 5943.970 kb on - strand at 5943.970 kb on - strand at 5943.970 kb on - strand at 5943.970 kb on - strand at 5944.095 kb on + strand, within Psyr_5011 at 5944.096 kb on - strand, within Psyr_5011 at 5944.096 kb on - strand, within Psyr_5011 at 5944.420 kb on + strand, within Psyr_5011 at 5944.420 kb on + strand, within Psyr_5011 at 5944.420 kb on + strand, within Psyr_5011 at 5944.421 kb on - strand, within Psyr_5011 at 5944.421 kb on - strand, within Psyr_5011 at 5944.460 kb on - strand, within Psyr_5011 at 5944.460 kb on - strand, within Psyr_5011 at 5944.501 kb on + strand, within Psyr_5011 at 5944.501 kb on + strand, within Psyr_5011 at 5944.501 kb on + strand, within Psyr_5011 at 5944.502 kb on - strand, within Psyr_5011 at 5944.502 kb on - strand, within Psyr_5011 at 5944.502 kb on - strand, within Psyr_5011 at 5944.502 kb on - strand, within Psyr_5011 at 5944.502 kb on - strand, within Psyr_5011 at 5944.625 kb on + strand, within Psyr_5011 at 5944.625 kb on + strand, within Psyr_5011 at 5944.626 kb on - strand, within Psyr_5011 at 5944.626 kb on - strand, within Psyr_5011 at 5944.626 kb on - strand, within Psyr_5011 at 5944.626 kb on - strand, within Psyr_5011 at 5944.626 kb on - strand, within Psyr_5011 at 5944.626 kb on - strand, within Psyr_5011 at 5944.626 kb on - strand, within Psyr_5011 at 5944.626 kb on - strand, within Psyr_5011
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 5,941,802 - +1.1 5,941,805 - -0.5 5,941,977 + Psyr_5009 0.11 +0.1 5,941,977 + Psyr_5009 0.11 +0.2 5,941,991 - Psyr_5009 0.13 +1.1 5,942,004 + Psyr_5009 0.14 +0.1 5,942,004 + Psyr_5009 0.14 +2.1 5,942,005 - Psyr_5009 0.15 +1.1 5,942,005 - Psyr_5009 0.15 +0.8 5,942,165 + Psyr_5009 0.35 -0.5 5,942,165 + Psyr_5009 0.35 +1.1 5,942,166 - Psyr_5009 0.35 +1.7 5,942,166 - Psyr_5009 0.35 -0.9 5,942,183 + Psyr_5009 0.37 -0.1 5,942,183 + Psyr_5009 0.37 -1.7 5,942,183 + Psyr_5009 0.37 +1.1 5,942,184 - Psyr_5009 0.38 +0.4 5,942,265 - Psyr_5009 0.48 +0.6 5,942,468 + Psyr_5009 0.74 -0.3 5,942,468 + Psyr_5009 0.74 -1.5 5,942,469 - Psyr_5009 0.74 +1.6 5,942,469 - Psyr_5009 0.74 -0.1 5,942,573 + Psyr_5009 0.88 +1.5 5,942,573 + Psyr_5009 0.88 +0.6 5,942,573 + Psyr_5009 0.88 -0.2 5,942,573 + Psyr_5009 0.88 -0.9 5,942,696 + +2.1 5,942,696 + +0.9 5,942,696 + +0.0 5,942,696 + +2.0 5,942,696 + +0.9 5,942,696 + +0.1 5,942,697 - -0.5 5,942,697 - +0.3 5,942,697 - +1.1 5,942,726 + +0.4 5,942,726 + +0.5 5,942,726 + -0.2 5,942,726 + +0.9 5,942,726 + +0.6 5,942,726 + +0.9 5,942,726 + +1.0 5,942,726 + -0.3 5,942,726 + -1.5 5,942,726 + +0.5 5,942,726 + +1.1 5,942,726 + +1.1 5,942,727 - -0.0 5,942,727 - -0.2 5,942,727 - -0.5 5,942,727 - +0.6 5,942,727 - +0.3 5,942,727 - -0.2 5,942,727 - +0.7 5,942,727 - +0.3 5,942,727 - -0.0 5,942,727 - -0.4 5,942,727 - +0.4 5,942,727 - -0.1 5,942,727 - +0.0 5,942,727 - +1.0 5,942,727 - +1.1 5,942,727 - +1.3 5,942,727 - +1.8 5,942,727 - -0.1 5,942,727 - +0.6 5,942,813 + Psyr_5010 0.11 -0.7 5,942,813 + Psyr_5010 0.11 +0.1 5,942,813 + Psyr_5010 0.11 +0.2 5,942,814 - Psyr_5010 0.11 +1.5 5,942,839 - Psyr_5010 0.14 -0.1 5,942,903 + Psyr_5010 0.20 +1.6 5,942,903 + Psyr_5010 0.20 +0.2 5,942,903 + Psyr_5010 0.20 +0.1 5,942,904 - Psyr_5010 0.20 -0.1 5,943,012 - Psyr_5010 0.32 +0.2 5,943,012 - Psyr_5010 0.32 +1.7 5,943,098 - Psyr_5010 0.41 -0.1 5,943,098 - Psyr_5010 0.41 +2.1 5,943,098 - Psyr_5010 0.41 +0.5 5,943,098 - Psyr_5010 0.41 +0.5 5,943,098 - Psyr_5010 0.41 -0.4 5,943,098 - Psyr_5010 0.41 +1.4 5,943,098 - Psyr_5010 0.41 +0.9 5,943,098 - Psyr_5010 0.41 +0.3 5,943,350 + Psyr_5010 0.67 +0.5 5,943,350 + Psyr_5010 0.67 +0.0 5,943,350 + Psyr_5010 0.67 -1.2 5,943,350 + Psyr_5010 0.67 +0.5 5,943,350 + Psyr_5010 0.67 +1.0 5,943,350 + Psyr_5010 0.67 +0.5 5,943,351 - Psyr_5010 0.68 +1.1 5,943,351 - Psyr_5010 0.68 -1.5 5,943,351 - Psyr_5010 0.68 +0.0 5,943,351 - Psyr_5010 0.68 -0.9 5,943,351 - Psyr_5010 0.68 +0.4 5,943,351 - Psyr_5010 0.68 +1.5 5,943,351 - Psyr_5010 0.68 -0.5 5,943,351 - Psyr_5010 0.68 +0.3 5,943,351 - Psyr_5010 0.68 +0.5 5,943,351 - Psyr_5010 0.68 +0.3 5,943,419 + Psyr_5010 0.75 +0.8 5,943,420 - Psyr_5010 0.75 +0.2 5,943,629 + -0.4 5,943,711 + +0.0 5,943,969 + -1.6 5,943,969 + -1.2 5,943,969 + +0.5 5,943,969 + +0.1 5,943,969 + +0.5 5,943,969 + +1.7 5,943,970 - +0.2 5,943,970 - +1.4 5,943,970 - +1.7 5,943,970 - -1.1 5,943,970 - -0.9 5,943,970 - +0.4 5,944,095 + Psyr_5011 0.13 +0.8 5,944,096 - Psyr_5011 0.13 +0.6 5,944,096 - Psyr_5011 0.13 +0.9 5,944,420 + Psyr_5011 0.22 -1.0 5,944,420 + Psyr_5011 0.22 +0.3 5,944,420 + Psyr_5011 0.22 +0.2 5,944,421 - Psyr_5011 0.22 -0.2 5,944,421 - Psyr_5011 0.22 -0.0 5,944,460 - Psyr_5011 0.23 -0.1 5,944,460 - Psyr_5011 0.23 -0.2 5,944,501 + Psyr_5011 0.25 +0.7 5,944,501 + Psyr_5011 0.25 -0.1 5,944,501 + Psyr_5011 0.25 +0.3 5,944,502 - Psyr_5011 0.25 -0.5 5,944,502 - Psyr_5011 0.25 -0.7 5,944,502 - Psyr_5011 0.25 -0.5 5,944,502 - Psyr_5011 0.25 -0.2 5,944,502 - Psyr_5011 0.25 +0.7 5,944,625 + Psyr_5011 0.28 -0.1 5,944,625 + Psyr_5011 0.28 +1.7 5,944,626 - Psyr_5011 0.28 -0.2 5,944,626 - Psyr_5011 0.28 +0.1 5,944,626 - Psyr_5011 0.28 -0.5 5,944,626 - Psyr_5011 0.28 +1.1 5,944,626 - Psyr_5011 0.28 -1.9 5,944,626 - Psyr_5011 0.28 -0.8 5,944,626 - Psyr_5011 0.28 -0.6 5,944,626 - Psyr_5011 0.28 +1.0
Or see this region's nucleotide sequence