Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3804 and Psyr_3805 overlap by 4 nucleotides Psyr_3805 and Psyr_3806 are separated by 665 nucleotides
Psyr_3804: Psyr_3804 - ATP-dependent DNA helicase, RecQ-like protein, at 4,522,205 to 4,524,301
_3804
Psyr_3805: Psyr_3805 - hypothetical protein, at 4,524,298 to 4,525,665
_3805
Psyr_3806: Psyr_3806 - hypothetical protein, at 4,526,331 to 4,526,816
_3806
Position (kb) 4524
4525
4526 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4523.373 kb on + strand, within Psyr_3804 at 4523.373 kb on + strand, within Psyr_3804 at 4523.373 kb on + strand, within Psyr_3804 at 4523.373 kb on + strand, within Psyr_3804 at 4523.374 kb on - strand, within Psyr_3804 at 4523.374 kb on - strand, within Psyr_3804 at 4523.374 kb on - strand, within Psyr_3804 at 4523.374 kb on - strand, within Psyr_3804 at 4523.515 kb on + strand, within Psyr_3804 at 4523.533 kb on - strand, within Psyr_3804 at 4523.533 kb on - strand, within Psyr_3804 at 4523.564 kb on + strand, within Psyr_3804 at 4523.564 kb on + strand, within Psyr_3804 at 4523.564 kb on + strand, within Psyr_3804 at 4523.564 kb on + strand, within Psyr_3804 at 4523.564 kb on + strand, within Psyr_3804 at 4523.564 kb on + strand, within Psyr_3804 at 4523.564 kb on + strand, within Psyr_3804 at 4523.565 kb on - strand, within Psyr_3804 at 4523.565 kb on - strand, within Psyr_3804 at 4523.588 kb on - strand, within Psyr_3804 at 4523.588 kb on - strand, within Psyr_3804 at 4523.598 kb on + strand, within Psyr_3804 at 4523.677 kb on + strand, within Psyr_3804 at 4523.677 kb on + strand, within Psyr_3804 at 4523.677 kb on + strand, within Psyr_3804 at 4523.677 kb on + strand, within Psyr_3804 at 4523.677 kb on + strand, within Psyr_3804 at 4523.678 kb on - strand, within Psyr_3804 at 4523.678 kb on - strand, within Psyr_3804 at 4523.682 kb on + strand, within Psyr_3804 at 4523.683 kb on - strand, within Psyr_3804 at 4523.683 kb on - strand, within Psyr_3804 at 4523.689 kb on + strand, within Psyr_3804 at 4523.690 kb on - strand, within Psyr_3804 at 4523.717 kb on - strand, within Psyr_3804 at 4523.777 kb on + strand, within Psyr_3804 at 4523.778 kb on - strand, within Psyr_3804 at 4523.778 kb on - strand, within Psyr_3804 at 4523.811 kb on + strand, within Psyr_3804 at 4523.811 kb on + strand, within Psyr_3804 at 4523.811 kb on + strand, within Psyr_3804 at 4523.811 kb on + strand, within Psyr_3804 at 4523.811 kb on + strand, within Psyr_3804 at 4523.812 kb on - strand, within Psyr_3804 at 4523.812 kb on - strand, within Psyr_3804 at 4523.812 kb on - strand, within Psyr_3804 at 4523.812 kb on - strand, within Psyr_3804 at 4523.812 kb on - strand, within Psyr_3804 at 4523.827 kb on + strand, within Psyr_3804 at 4523.868 kb on + strand, within Psyr_3804 at 4523.868 kb on + strand, within Psyr_3804 at 4523.868 kb on + strand, within Psyr_3804 at 4523.868 kb on + strand, within Psyr_3804 at 4523.869 kb on - strand, within Psyr_3804 at 4523.869 kb on - strand, within Psyr_3804 at 4523.869 kb on - strand, within Psyr_3804 at 4523.959 kb on + strand, within Psyr_3804 at 4523.992 kb on - strand, within Psyr_3804 at 4523.992 kb on - strand, within Psyr_3804 at 4524.006 kb on + strand, within Psyr_3804 at 4524.006 kb on + strand, within Psyr_3804 at 4524.007 kb on - strand, within Psyr_3804 at 4524.007 kb on - strand, within Psyr_3804 at 4524.007 kb on - strand, within Psyr_3804 at 4524.009 kb on + strand, within Psyr_3804 at 4524.009 kb on + strand, within Psyr_3804 at 4524.076 kb on - strand, within Psyr_3804 at 4524.132 kb on + strand at 4524.132 kb on + strand at 4524.132 kb on + strand at 4524.132 kb on + strand at 4524.132 kb on + strand at 4524.133 kb on - strand at 4524.133 kb on - strand at 4524.133 kb on - strand at 4524.151 kb on + strand at 4524.160 kb on + strand at 4524.160 kb on + strand at 4524.160 kb on + strand at 4524.160 kb on + strand at 4524.160 kb on + strand at 4524.160 kb on + strand at 4524.160 kb on + strand at 4524.160 kb on + strand at 4524.160 kb on + strand at 4524.161 kb on - strand at 4524.161 kb on - strand at 4524.161 kb on - strand at 4524.161 kb on - strand at 4525.218 kb on + strand, within Psyr_3805 at 4525.218 kb on + strand, within Psyr_3805 at 4525.278 kb on + strand, within Psyr_3805 at 4525.278 kb on + strand, within Psyr_3805 at 4525.279 kb on - strand, within Psyr_3805 at 4525.353 kb on + strand, within Psyr_3805 at 4525.371 kb on + strand, within Psyr_3805 at 4525.398 kb on + strand, within Psyr_3805 at 4525.623 kb on - strand at 4525.666 kb on + strand at 4525.694 kb on + strand at 4525.695 kb on - strand at 4525.783 kb on - strand at 4525.788 kb on - strand at 4525.792 kb on - strand at 4525.848 kb on + strand at 4525.852 kb on + strand at 4526.046 kb on + strand at 4526.076 kb on + strand at 4526.077 kb on - strand at 4526.112 kb on - strand at 4526.191 kb on - strand at 4526.198 kb on + strand at 4526.199 kb on - strand at 4526.208 kb on + strand at 4526.312 kb on + strand at 4526.313 kb on - strand at 4526.379 kb on + strand at 4526.420 kb on - strand, within Psyr_3806 at 4526.447 kb on + strand, within Psyr_3806 at 4526.447 kb on + strand, within Psyr_3806 at 4526.447 kb on + strand, within Psyr_3806 at 4526.447 kb on + strand, within Psyr_3806 at 4526.447 kb on + strand, within Psyr_3806 at 4526.448 kb on - strand, within Psyr_3806 at 4526.448 kb on - strand, within Psyr_3806 at 4526.448 kb on - strand, within Psyr_3806 at 4526.452 kb on - strand, within Psyr_3806 at 4526.564 kb on + strand, within Psyr_3806 at 4526.614 kb on + strand, within Psyr_3806
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 4,523,373 + Psyr_3804 0.56 -1.5 4,523,373 + Psyr_3804 0.56 +0.4 4,523,373 + Psyr_3804 0.56 -0.2 4,523,373 + Psyr_3804 0.56 +0.0 4,523,374 - Psyr_3804 0.56 -0.0 4,523,374 - Psyr_3804 0.56 +0.5 4,523,374 - Psyr_3804 0.56 -1.8 4,523,374 - Psyr_3804 0.56 -1.0 4,523,515 + Psyr_3804 0.62 -1.7 4,523,533 - Psyr_3804 0.63 +0.5 4,523,533 - Psyr_3804 0.63 -1.6 4,523,564 + Psyr_3804 0.65 -1.8 4,523,564 + Psyr_3804 0.65 +1.3 4,523,564 + Psyr_3804 0.65 -1.8 4,523,564 + Psyr_3804 0.65 +0.2 4,523,564 + Psyr_3804 0.65 +0.2 4,523,564 + Psyr_3804 0.65 +2.0 4,523,564 + Psyr_3804 0.65 +0.1 4,523,565 - Psyr_3804 0.65 -1.8 4,523,565 - Psyr_3804 0.65 -0.8 4,523,588 - Psyr_3804 0.66 -0.6 4,523,588 - Psyr_3804 0.66 -1.2 4,523,598 + Psyr_3804 0.66 +0.5 4,523,677 + Psyr_3804 0.70 +0.2 4,523,677 + Psyr_3804 0.70 +0.8 4,523,677 + Psyr_3804 0.70 -0.2 4,523,677 + Psyr_3804 0.70 -1.2 4,523,677 + Psyr_3804 0.70 +1.8 4,523,678 - Psyr_3804 0.70 +0.8 4,523,678 - Psyr_3804 0.70 -0.5 4,523,682 + Psyr_3804 0.70 +0.8 4,523,683 - Psyr_3804 0.70 -0.6 4,523,683 - Psyr_3804 0.70 +0.4 4,523,689 + Psyr_3804 0.71 -0.4 4,523,690 - Psyr_3804 0.71 -1.4 4,523,717 - Psyr_3804 0.72 -3.3 4,523,777 + Psyr_3804 0.75 +0.1 4,523,778 - Psyr_3804 0.75 -3.3 4,523,778 - Psyr_3804 0.75 +1.7 4,523,811 + Psyr_3804 0.77 +0.2 4,523,811 + Psyr_3804 0.77 -2.4 4,523,811 + Psyr_3804 0.77 -0.1 4,523,811 + Psyr_3804 0.77 +1.4 4,523,811 + Psyr_3804 0.77 -1.2 4,523,812 - Psyr_3804 0.77 -1.3 4,523,812 - Psyr_3804 0.77 -0.4 4,523,812 - Psyr_3804 0.77 -0.3 4,523,812 - Psyr_3804 0.77 -0.6 4,523,812 - Psyr_3804 0.77 -1.6 4,523,827 + Psyr_3804 0.77 +1.4 4,523,868 + Psyr_3804 0.79 -0.0 4,523,868 + Psyr_3804 0.79 +0.2 4,523,868 + Psyr_3804 0.79 -0.5 4,523,868 + Psyr_3804 0.79 -0.4 4,523,869 - Psyr_3804 0.79 +0.0 4,523,869 - Psyr_3804 0.79 -0.4 4,523,869 - Psyr_3804 0.79 -1.3 4,523,959 + Psyr_3804 0.84 -1.3 4,523,992 - Psyr_3804 0.85 +0.5 4,523,992 - Psyr_3804 0.85 -0.4 4,524,006 + Psyr_3804 0.86 +0.5 4,524,006 + Psyr_3804 0.86 -0.4 4,524,007 - Psyr_3804 0.86 -1.2 4,524,007 - Psyr_3804 0.86 +1.2 4,524,007 - Psyr_3804 0.86 +0.4 4,524,009 + Psyr_3804 0.86 -1.1 4,524,009 + Psyr_3804 0.86 -2.2 4,524,076 - Psyr_3804 0.89 -0.7 4,524,132 + -1.7 4,524,132 + +0.1 4,524,132 + +0.6 4,524,132 + -1.6 4,524,132 + -0.2 4,524,133 - -1.0 4,524,133 - -0.1 4,524,133 - -0.7 4,524,151 + +0.4 4,524,160 + -0.2 4,524,160 + +0.4 4,524,160 + +0.3 4,524,160 + -0.9 4,524,160 + +1.4 4,524,160 + -0.0 4,524,160 + +1.4 4,524,160 + +0.6 4,524,160 + -0.4 4,524,161 - -0.9 4,524,161 - +0.2 4,524,161 - +0.4 4,524,161 - -0.5 4,525,218 + Psyr_3805 0.67 -0.4 4,525,218 + Psyr_3805 0.67 -0.2 4,525,278 + Psyr_3805 0.72 -0.8 4,525,278 + Psyr_3805 0.72 -1.5 4,525,279 - Psyr_3805 0.72 +0.8 4,525,353 + Psyr_3805 0.77 -1.4 4,525,371 + Psyr_3805 0.78 -0.8 4,525,398 + Psyr_3805 0.80 +1.2 4,525,623 - -0.6 4,525,666 + -0.5 4,525,694 + -2.3 4,525,695 - +0.4 4,525,783 - +0.7 4,525,788 - -0.2 4,525,792 - -0.1 4,525,848 + +0.6 4,525,852 + +0.1 4,526,046 + -1.8 4,526,076 + -1.0 4,526,077 - -0.3 4,526,112 - -0.3 4,526,191 - +0.5 4,526,198 + -3.7 4,526,199 - +2.8 4,526,208 + -3.5 4,526,312 + -1.1 4,526,313 - -1.5 4,526,379 + -0.1 4,526,420 - Psyr_3806 0.18 -0.2 4,526,447 + Psyr_3806 0.24 -0.1 4,526,447 + Psyr_3806 0.24 +0.8 4,526,447 + Psyr_3806 0.24 +0.2 4,526,447 + Psyr_3806 0.24 -2.7 4,526,447 + Psyr_3806 0.24 -1.1 4,526,448 - Psyr_3806 0.24 -1.7 4,526,448 - Psyr_3806 0.24 -1.0 4,526,448 - Psyr_3806 0.24 -2.0 4,526,452 - Psyr_3806 0.25 -2.4 4,526,564 + Psyr_3806 0.48 +0.2 4,526,614 + Psyr_3806 0.58 -1.5
Or see this region's nucleotide sequence