Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3776

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
4,494,355	+				-0.1
4,494,355	+				+0.1
4,494,355	+				-1.2
4,494,396	-		Psyr_3775	0.11	+1.5
4,494,396	-		Psyr_3775	0.11	-0.4
4,494,396	-		Psyr_3775	0.11	-1.4
4,494,396	-		Psyr_3775	0.11	-0.4
4,494,396	-		Psyr_3775	0.11	+0.1
4,494,396	-		Psyr_3775	0.11	+0.3
4,494,444	+		Psyr_3775	0.17	-0.6
4,494,444	+		Psyr_3775	0.17	+1.0
4,494,444	+		Psyr_3775	0.17	-1.3
4,494,445	-		Psyr_3775	0.17	+0.2
4,494,445	-		Psyr_3775	0.17	-0.1
4,494,675	+		Psyr_3775	0.45	-1.7
4,494,675	+		Psyr_3775	0.45	+0.1
4,494,676	-		Psyr_3775	0.45	+0.5
4,494,676	-		Psyr_3775	0.45	+0.6
4,494,676	-		Psyr_3775	0.45	+0.1
4,494,676	-		Psyr_3775	0.45	-0.2
4,494,735	+		Psyr_3775	0.53	+0.8
4,494,927	+		Psyr_3775	0.76	-1.2
4,494,927	+		Psyr_3775	0.76	+1.0
4,494,927	+		Psyr_3775	0.76	-0.5
4,494,928	-		Psyr_3775	0.76	+1.2
4,494,928	-		Psyr_3775	0.76	+0.3
4,494,928	-		Psyr_3775	0.76	-3.0
4,494,928	-		Psyr_3775	0.76	+0.9
4,494,928	-		Psyr_3775	0.76	+1.4
4,494,928	-		Psyr_3775	0.76	+0.6
4,494,950	+		Psyr_3775	0.79	-1.7
4,495,021	+		Psyr_3775	0.87	-1.8
4,495,021	+		Psyr_3775	0.87	+0.7
4,495,022	-		Psyr_3775	0.88	-1.4
4,495,022	-		Psyr_3775	0.88	+0.8
4,495,124	-				+0.9
4,495,147	+				+0.0
4,495,159	+				+1.5
4,495,159	+				+1.0
4,495,160	-				-0.2
4,495,160	-				+0.0
4,495,160	-				-1.1
4,495,167	+				-1.2
4,495,167	+				+0.1
4,495,168	-				-0.1
4,495,168	-				+0.8
4,495,193	-				+0.0
4,495,213	-				+0.3
4,495,556	-		Psyr_3776	0.50	-0.2
4,495,647	+		Psyr_3776	0.71	-1.9
4,495,647	+		Psyr_3776	0.71	+0.1
4,495,647	+		Psyr_3776	0.71	-0.2
4,495,648	-		Psyr_3776	0.71	-0.2
4,495,648	-		Psyr_3776	0.71	-2.7
4,495,648	-		Psyr_3776	0.71	-1.0
4,495,648	-		Psyr_3776	0.71	-0.7
4,495,798	+				+0.3
4,495,798	+				+1.8
4,495,798	+				-2.0
4,495,798	+				-0.8
4,495,799	-				+0.8
4,495,799	-				+0.8
4,495,799	-				+0.1
4,495,885	-		Psyr_3777	0.16	-0.5
4,495,977	+		Psyr_3777	0.35	+0.6
4,495,991	+		Psyr_3777	0.37	+0.4
4,495,992	-		Psyr_3777	0.38	+0.8
4,495,992	-		Psyr_3777	0.38	-0.4
4,496,027	+		Psyr_3777	0.45	+0.6
4,496,048	-		Psyr_3777	0.49	-1.5
4,496,048	-		Psyr_3777	0.49	-1.2
4,496,136	-		Psyr_3777	0.66	-0.7
4,496,265	+				-0.6
4,496,340	+				-0.7
4,496,341	-				+0.3
4,496,397	+				-2.4
4,496,404	+				-0.3
4,496,404	+				+0.8
4,496,405	-				+0.7
4,496,405	-				-0.1
4,496,433	+				+0.1
4,496,433	+				-1.0
4,496,433	+				+1.6
4,496,433	+				+0.1
4,496,433	+				+0.2
4,496,433	+				-0.1
4,496,433	+				-0.1
4,496,434	-				-0.2
4,496,434	-				-2.0
4,496,434	-				+0.9
4,496,434	-				+0.3
4,496,434	-				-0.2
4,496,434	-				-1.3
4,496,434	-				-0.3
4,496,437	+				+1.0
4,496,770	+		Psyr_3778	0.33	-0.7
4,496,770	+		Psyr_3778	0.33	+0.8
4,496,771	-		Psyr_3778	0.33	-1.2
4,496,771	-		Psyr_3778	0.33	+1.0