Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3405

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
4,064,261	+		Psyr_3404	0.71	-0.2
4,064,261	+		Psyr_3404	0.71	-0.5
4,064,261	+		Psyr_3404	0.71	+0.9
4,064,261	+		Psyr_3404	0.71	+0.3
4,064,261	+		Psyr_3404	0.71	-0.1
4,064,262	-		Psyr_3404	0.71	+0.9
4,064,262	-		Psyr_3404	0.71	+0.8
4,064,262	-		Psyr_3404	0.71	+0.5
4,064,262	-		Psyr_3404	0.71	-1.4
4,064,262	-		Psyr_3404	0.71	+0.5
4,064,285	+		Psyr_3404	0.72	+0.8
4,064,285	+		Psyr_3404	0.72	+0.8
4,064,285	+		Psyr_3404	0.72	-0.4
4,064,285	+		Psyr_3404	0.72	+0.6
4,064,286	-		Psyr_3404	0.72	+0.6
4,064,286	-		Psyr_3404	0.72	-0.7
4,064,416	+		Psyr_3404	0.77	+1.0
4,064,417	-		Psyr_3404	0.77	+0.6
4,064,417	-		Psyr_3404	0.77	+0.4
4,064,468	+		Psyr_3404	0.79	+1.3
4,064,622	-		Psyr_3404	0.84	-0.7
4,064,722	+		Psyr_3404	0.88	+1.3
4,064,999	+				-2.4
4,064,999	+				+0.3
4,065,000	-				-1.1
4,065,000	-				+0.1
4,065,000	-				-1.1
4,065,026	+				+0.9
4,065,026	+				-1.0
4,065,027	-				-0.6
4,065,027	-				-0.4
4,065,114	+				+0.6
4,065,115	-				-0.0
4,065,116	+				-1.7
4,065,116	+				+0.0
4,065,117	-				-0.3
4,065,175	+				+0.6
4,065,175	+				-0.6
4,065,175	+				+1.5
4,065,175	+				+1.0
4,065,175	+				+0.4
4,065,176	-				+1.1
4,065,176	-				-0.2
4,065,176	-				+0.8
4,065,176	-				-0.5
4,065,176	-				+1.6
4,065,176	-				+0.3
4,065,176	-				-1.2
4,065,176	-				-0.2
4,065,176	-				-0.2
4,065,176	-				-0.8
4,065,321	+		Psyr_3405	0.18	+1.5
4,065,321	+		Psyr_3405	0.18	+0.1
4,065,321	+		Psyr_3405	0.18	+0.5
4,065,322	-		Psyr_3405	0.18	-0.2
4,065,613	+		Psyr_3405	0.54	-0.7
4,065,613	+		Psyr_3405	0.54	+1.5
4,065,614	-		Psyr_3405	0.54	-0.0
4,065,614	-		Psyr_3405	0.54	-1.4
4,065,658	+		Psyr_3405	0.60	-0.0
4,065,718	-		Psyr_3405	0.67	+1.0
4,065,759	+		Psyr_3405	0.73	-2.1
4,065,759	+		Psyr_3405	0.73	+0.5
4,065,759	+		Psyr_3405	0.73	+0.3
4,065,759	+		Psyr_3405	0.73	+1.3
4,066,039	+				-0.2
4,066,039	+				+1.0
4,066,162	+				-0.4
4,066,162	+				-0.5
4,066,162	+				+0.3
4,066,162	+				+1.3
4,066,163	-				-2.4
4,066,163	-				+1.3
4,066,163	-				+0.6
4,066,163	-				+0.8
4,066,163	-				-1.8
4,066,163	-				+0.3
4,066,250	+		Psyr_3406	0.12	-0.8
4,066,250	+		Psyr_3406	0.12	+0.6
4,066,251	-		Psyr_3406	0.12	+1.1
4,066,345	+		Psyr_3406	0.18	-0.5
4,066,346	-		Psyr_3406	0.18	-0.0
4,066,360	+		Psyr_3406	0.19	-1.5
4,066,361	-		Psyr_3406	0.19	-0.0
4,066,456	+		Psyr_3406	0.25	-0.2
4,066,720	+		Psyr_3406	0.42	-0.1
4,066,720	+		Psyr_3406	0.42	+0.6
4,066,720	+		Psyr_3406	0.42	+0.7
4,066,720	+		Psyr_3406	0.42	-2.1
4,066,721	-		Psyr_3406	0.42	-0.5
4,066,721	-		Psyr_3406	0.42	+1.8
4,066,721	-		Psyr_3406	0.42	-0.2
4,066,721	-		Psyr_3406	0.42	+1.3
4,066,721	-		Psyr_3406	0.42	+2.3
4,066,721	-		Psyr_3406	0.42	-1.2
4,066,721	-		Psyr_3406	0.42	+1.0