Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3402

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
4,058,151	+		Psyr_3401	0.15	-2.2
4,058,151	+		Psyr_3401	0.15	-0.0
4,058,151	+		Psyr_3401	0.15	-1.2
4,058,151	+		Psyr_3401	0.15	-0.2
4,058,151	+		Psyr_3401	0.15	+1.0
4,058,151	+		Psyr_3401	0.15	+0.2
4,058,151	+		Psyr_3401	0.15	-0.2
4,058,152	-		Psyr_3401	0.15	+0.4
4,058,152	-		Psyr_3401	0.15	+0.4
4,058,152	-		Psyr_3401	0.15	-0.2
4,058,460	-		Psyr_3401	0.51	-0.1
4,058,463	+		Psyr_3401	0.51	+1.0
4,058,463	+		Psyr_3401	0.51	+2.1
4,058,463	+		Psyr_3401	0.51	+1.1
4,058,463	+		Psyr_3401	0.51	-0.0
4,058,463	+		Psyr_3401	0.51	-0.5
4,058,464	-		Psyr_3401	0.51	+2.8
4,058,464	-		Psyr_3401	0.51	+0.8
4,058,464	-		Psyr_3401	0.51	+0.7
4,058,464	-		Psyr_3401	0.51	+0.8
4,058,464	-		Psyr_3401	0.51	+0.2
4,058,464	-		Psyr_3401	0.51	-0.4
4,058,637	+		Psyr_3401	0.72	-1.6
4,058,638	-		Psyr_3401	0.72	-0.2
4,058,638	-		Psyr_3401	0.72	+1.6
4,058,638	-		Psyr_3401	0.72	-1.0
4,058,638	-		Psyr_3401	0.72	+0.8
4,058,666	+		Psyr_3401	0.75	+0.3
4,058,666	+		Psyr_3401	0.75	-1.8
4,058,667	-		Psyr_3401	0.75	-1.4
4,058,667	-		Psyr_3401	0.75	+1.3
4,058,667	-		Psyr_3401	0.75	-0.4
4,058,667	-		Psyr_3401	0.75	-0.2
4,058,667	-		Psyr_3401	0.75	+1.3
4,058,667	-		Psyr_3401	0.75	+1.4
4,058,932	+				-2.0
4,058,932	+				+0.2
4,058,932	+				-0.8
4,058,933	-				+0.5
4,058,933	-				+0.2
4,058,942	+				-0.2
4,058,942	+				-1.2
4,058,943	-				+0.8
4,058,991	+				+2.0
4,058,991	+				-0.1
4,059,122	+				-0.6
4,059,122	+				-0.1
4,059,122	+				+1.5
4,059,122	+				+0.2
4,059,122	+				+0.3
4,059,123	-				+0.7
4,059,123	-				-0.1
4,059,123	-				-0.6
4,059,123	-				+1.1
4,059,123	-				-0.7
4,059,123	-				+1.3
4,059,461	+		Psyr_3402	0.27	+1.6
4,059,462	-		Psyr_3402	0.27	+0.2
4,059,462	-		Psyr_3402	0.27	+0.8
4,060,178	+		Psyr_3402	0.76	+0.8
4,060,178	+		Psyr_3402	0.76	-1.0
4,060,178	+		Psyr_3402	0.76	+1.0
4,060,178	+		Psyr_3402	0.76	-0.4
4,060,178	+		Psyr_3402	0.76	+0.6
4,060,178	+		Psyr_3402	0.76	+0.9
4,060,178	+		Psyr_3402	0.76	+0.1
4,060,179	-		Psyr_3402	0.76	-2.2
4,060,313	+		Psyr_3402	0.85	+0.9
4,060,313	+		Psyr_3402	0.85	+1.6
4,060,332	+		Psyr_3402	0.87	-0.4
4,060,332	+		Psyr_3402	0.87	+1.5
4,060,332	+		Psyr_3402	0.87	+1.2
4,060,332	+		Psyr_3402	0.87	+0.3
4,060,332	+		Psyr_3402	0.87	+1.4
4,060,332	+		Psyr_3402	0.87	+0.6
4,060,333	-		Psyr_3402	0.87	+0.2
4,060,490	+				-0.7
4,060,490	+				-2.2
4,060,491	-				+0.8
4,060,508	-				+0.4
4,060,508	-				-0.6
4,060,512	+				-0.1
4,060,512	+				-0.7
4,060,512	+				+0.1
4,060,513	-				-0.5
4,060,513	-				-0.4
4,060,513	-				+0.4
4,060,513	-				-0.7
4,060,590	-				+0.6
4,060,930	+				+0.8
4,060,931	-				-0.6
4,061,012	-				+0.3
4,061,038	+				-0.2
4,061,112	+				-0.2
4,061,112	+				-1.2
4,061,170	+		Psyr_3403	0.12	+0.4
4,061,212	+		Psyr_3403	0.16	-0.4
4,061,343	+		Psyr_3403	0.28	+0.6
4,061,343	+		Psyr_3403	0.28	-0.1
4,061,343	+		Psyr_3403	0.28	-0.4
4,061,344	-		Psyr_3403	0.28	-0.5
4,061,344	-		Psyr_3403	0.28	+0.0
4,061,348	-		Psyr_3403	0.28	+0.3
4,061,348	-		Psyr_3403	0.28	-1.1
4,061,348	-		Psyr_3403	0.28	-0.2
4,061,454	+		Psyr_3403	0.38	-2.1
4,061,454	+		Psyr_3403	0.38	-1.4
4,061,455	-		Psyr_3403	0.38	+0.7
4,061,455	-		Psyr_3403	0.38	-0.7
4,061,455	-		Psyr_3403	0.38	+0.1