Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2899

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
3,476,585	+		Psyr_2897	0.41	-1.5
3,476,585	+		Psyr_2897	0.41	+0.8
3,476,586	-		Psyr_2897	0.41	+3.7
3,476,654	+		Psyr_2897	0.51	-1.7
3,476,654	+		Psyr_2897	0.51	-0.3
3,476,655	-		Psyr_2897	0.51	-0.1
3,476,941	+				-0.7
3,476,941	+				+0.5
3,476,941	+				+1.7
3,476,942	-				-0.3
3,476,942	-				-0.9
3,476,942	-				-0.3
3,476,942	-				+1.4
3,476,942	-				+0.7
3,476,942	-				-1.7
3,476,942	-				-1.9
3,476,942	-				-1.9
3,476,949	+				+0.9
3,476,949	+				-0.3
3,476,949	+				-0.3
3,476,950	-				-0.7
3,476,979	+				+0.7
3,477,021	+				+0.5
3,477,021	+				+1.4
3,477,022	-				+0.7
3,477,049	+				+0.9
3,477,050	-				+0.2
3,477,050	-				+1.1
3,477,124	-				-0.7
3,477,124	-				-0.9
3,477,124	-				-0.6
3,477,130	+				+0.0
3,477,234	+		Psyr_2898	0.30	+0.7
3,477,260	-		Psyr_2898	0.37	-0.8
3,477,309	+		Psyr_2898	0.51	-0.6
3,477,309	+		Psyr_2898	0.51	-1.0
3,477,310	-		Psyr_2898	0.51	-0.7
3,477,310	-		Psyr_2898	0.51	-0.2
3,477,310	-		Psyr_2898	0.51	+0.2
3,477,310	-		Psyr_2898	0.51	-1.9
3,477,310	-		Psyr_2898	0.51	-0.3
3,477,310	-		Psyr_2898	0.51	-0.8
3,477,413	+		Psyr_2898	0.79	-1.0
3,477,413	+		Psyr_2898	0.79	+1.6
3,477,414	-		Psyr_2898	0.80	+0.7
3,477,427	+		Psyr_2898	0.83	-2.2
3,477,428	-		Psyr_2898	0.83	+0.0
3,477,428	-		Psyr_2898	0.83	-0.3
3,477,428	-		Psyr_2898	0.83	-1.0
3,477,428	-		Psyr_2898	0.83	+0.7
3,477,495	+				+0.3
3,477,495	+				-0.1
3,477,495	+				+1.3
3,477,495	+				+2.0
3,477,495	+				-0.3
3,477,495	+				-0.8
3,477,496	-				+0.1
3,477,496	-				-2.3
3,477,496	-				+0.5
3,477,496	-				-0.5
3,477,496	-				+0.7
3,477,496	-				+0.5
3,477,518	-				+0.6
3,477,527	+				+0.1
3,477,528	-				-0.1
3,477,568	+				-0.3
3,477,568	+				-0.8
3,477,579	+				-0.9
3,477,579	+				+0.7
3,477,580	-				+0.7
3,477,584	-				+1.1
3,477,584	-				+0.3
3,477,674	+		Psyr_2899	0.45	+0.2
3,477,674	+		Psyr_2899	0.45	-1.3
3,477,675	-		Psyr_2899	0.45	-0.0
3,477,681	+		Psyr_2899	0.48	-1.3
3,477,722	-		Psyr_2899	0.65	-0.1
3,477,726	+		Psyr_2899	0.67	-2.1
3,477,726	+		Psyr_2899	0.67	-0.0
3,477,726	+		Psyr_2899	0.67	+2.4
3,477,726	+		Psyr_2899	0.67	-0.8
3,477,726	+		Psyr_2899	0.67	-1.3
3,477,727	-		Psyr_2899	0.68	+0.3
3,477,727	-		Psyr_2899	0.68	+0.7
3,477,727	-		Psyr_2899	0.68	-0.5
3,477,727	-		Psyr_2899	0.68	-2.4
3,477,732	+		Psyr_2899	0.70	-1.1
3,477,733	-		Psyr_2899	0.70	-1.1
3,477,808	+				-0.9
3,477,812	-				-3.2
3,477,812	-				-0.5
3,477,880	+				-0.4
3,477,881	-				+0.2
3,477,882	+				+1.7
3,477,882	+				+0.7
3,477,901	+				-0.1
3,478,038	+				+1.2
3,478,038	+				+0.7
3,478,038	+				-0.3
3,478,038	+				+1.0
3,478,038	+				-0.3
3,478,038	+				+0.3
3,478,039	-				+0.3
3,478,039	-				-1.3
3,478,113	+				-0.9
3,478,113	+				+1.7
3,478,114	-				+0.7
3,478,114	-				-1.3
3,478,175	-				-2.6
3,478,230	+				-0.2
3,478,304	+				-1.6
3,478,304	+				+0.9
3,478,304	+				+1.2
3,478,305	-				-0.2
3,478,375	+				-1.7
3,478,375	+				-0.6
3,478,376	-				+0.0
3,478,384	+				-0.3
3,478,384	+				+1.1
3,478,384	+				+0.8
3,478,384	+				-1.5
3,478,384	+				-0.2
3,478,384	+				-0.9
3,478,384	+				+0.4
3,478,384	+				-0.6
3,478,385	-				+1.2
3,478,481	+				-0.9
3,478,482	-				+0.7
3,478,493	+				-0.2
3,478,729	+		Psyr_2900	0.15	+0.3
3,478,730	-		Psyr_2900	0.15	+0.8