Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2849

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
3,421,438	+				+0.7
3,421,442	+				-1.3
3,421,443	-				-0.7
3,421,469	+				+0.2
3,421,469	+				+0.1
3,421,469	+				-1.3
3,421,470	-				-1.6
3,421,470	-				-2.3
3,421,533	+				-0.2
3,421,557	+		Psyr_2848	0.14	-1.6
3,421,558	-		Psyr_2848	0.14	-1.5
3,421,558	-		Psyr_2848	0.14	-1.5
3,421,622	-		Psyr_2848	0.29	-0.3
3,421,653	-		Psyr_2848	0.37	-0.3
3,421,696	-		Psyr_2848	0.47	-2.3
3,421,797	+		Psyr_2848	0.70	+0.4
3,421,797	+		Psyr_2848	0.70	+0.0
3,421,797	+		Psyr_2848	0.70	+0.0
3,421,798	-		Psyr_2848	0.71	+0.7
3,421,798	-		Psyr_2848	0.71	-2.0
3,421,893	-				+0.4
3,421,910	-				+0.4
3,421,924	-				+0.7
3,421,928	-				+0.7
3,421,955	+				-2.3
3,421,955	+				+0.0
3,421,955	+				-1.8
3,421,955	+				-1.6
3,421,955	+				-0.3
3,421,955	+				-0.6
3,421,955	+				-0.6
3,421,955	+				-1.1
3,421,955	+				+2.1
3,421,955	+				+0.7
3,421,956	-				+0.4
3,421,956	-				+0.2
3,421,956	-				-1.1
3,421,956	-				+1.3
3,421,956	-				-0.8
3,421,956	-				+0.1
3,421,956	-				-0.2
3,421,995	+				+0.0
3,421,997	+				+1.4
3,421,997	+				-1.3
3,421,997	+				+0.5
3,421,997	+				+0.1
3,422,001	+				+0.8
3,422,002	-				+1.4
3,422,002	-				+1.3
3,422,005	+				-1.3
3,422,099	+				+0.4
3,422,104	-				+0.1
3,422,185	+				-0.8
3,422,185	+				+0.5
3,422,185	+				+0.3
3,422,186	-				+0.5
3,422,186	-				-1.8
3,422,186	-				+0.1
3,422,186	-				-0.4
3,422,205	+				-0.3
3,422,205	+				-0.1
3,422,205	+				-0.6
3,422,205	+				+0.3
3,422,206	-				-0.1
3,422,206	-				-0.3
3,422,206	-				+0.3
3,422,367	+				+0.3
3,422,367	+				+1.7
3,422,367	+				-0.2
3,422,367	+				+0.1
3,422,367	+				-0.7
3,422,367	+				-0.3
3,422,367	+				+0.2
3,422,367	+				-0.3
3,422,367	+				+0.7
3,422,367	+				+0.1
3,422,367	+				+1.0
3,422,367	+				+0.9
3,422,367	+				+0.4
3,422,368	-				+1.3
3,422,368	-				+0.8
3,422,368	-				-0.6
3,422,368	-				-0.9
3,422,368	-				-0.3
3,422,368	-				+0.1
3,422,368	-				+0.4
3,422,368	-				+0.7
3,422,368	-				+0.5
3,422,373	+				+0.1
3,422,373	+				+0.4
3,422,373	+				+1.1
3,422,373	+				+0.9
3,423,114	+				-1.1
3,423,146	+				-0.3
3,423,146	+				-1.7
3,423,184	+				+1.1
3,423,184	+				-1.6
3,423,184	+				+0.7
3,423,184	+				-0.6
3,423,184	+				+1.6
3,423,184	+				-0.1
3,423,184	+				+2.7
3,423,185	-				-0.4
3,423,185	-				-0.3
3,423,185	-				+0.2
3,423,185	-				+1.9
3,423,185	-				-1.4
3,423,185	-				+0.5
3,423,189	-				+0.0
3,423,189	-				-1.0
3,423,236	-		Psyr_2850	0.19	+0.4
3,423,337	-		Psyr_2850	0.47	+0.8
3,423,337	-		Psyr_2850	0.47	+0.3
3,423,337	-		Psyr_2850	0.47	+0.7
3,423,360	+		Psyr_2850	0.53	+1.3
3,423,360	+		Psyr_2850	0.53	-0.0
3,423,360	+		Psyr_2850	0.53	+0.7
3,423,360	+		Psyr_2850	0.53	-0.0
3,423,361	-		Psyr_2850	0.54	-2.2
3,423,361	-		Psyr_2850	0.54	+0.5
3,423,492	+				-0.9
3,423,594	+				+1.2
3,423,607	+				+0.7
3,423,826	-		Psyr_2851	0.61	-0.3
3,423,845	-		Psyr_2851	0.67	-0.2
3,423,873	+		Psyr_2851	0.75	-2.3
3,423,874	-		Psyr_2851	0.75	-0.1
3,423,993	+				+0.7
3,423,993	+				-0.9
3,424,083	-				-0.3
3,424,083	-				+0.1
3,424,083	-				-0.7