Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2712

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
3,293,331	+		Psyr_2711	0.68	+0.4
3,293,331	+		Psyr_2711	0.68	+2.1
3,293,332	-		Psyr_2711	0.68	+0.7
3,293,332	-		Psyr_2711	0.68	+0.1
3,293,372	-		Psyr_2711	0.70	-0.6
3,293,435	+		Psyr_2711	0.74	+1.0
3,293,435	+		Psyr_2711	0.74	+0.7
3,293,436	-		Psyr_2711	0.74	+0.3
3,293,436	-		Psyr_2711	0.74	-1.2
3,293,436	-		Psyr_2711	0.74	-0.2
3,293,436	-		Psyr_2711	0.74	+0.7
3,293,436	-		Psyr_2711	0.74	+0.9
3,293,443	+		Psyr_2711	0.74	-0.1
3,293,444	-		Psyr_2711	0.74	-1.3
3,293,581	+		Psyr_2711	0.81	+0.1
3,293,600	-		Psyr_2711	0.82	-0.3
3,293,707	-		Psyr_2711	0.87	+0.4
3,293,745	-		Psyr_2711	0.89	-1.4
3,293,822	+				-0.3
3,293,842	+				+0.5
3,293,842	+				+0.4
3,293,843	-				-0.3
3,293,843	-				+1.4
3,293,876	-				-0.0
3,294,023	+				-0.2
3,294,023	+				-0.3
3,294,023	+				+1.1
3,294,023	+				+0.5
3,294,023	+				+0.9
3,294,024	-				+1.3
3,294,024	-				-0.2
3,294,100	-				-0.0
3,294,109	-				+0.5
3,294,157	+				+0.3
3,294,157	+				-1.1
3,294,158	-				-0.8
3,294,158	-				-0.3
3,294,158	-				+0.1
3,294,158	-				-0.2
3,294,158	-				-0.3
3,294,310	+				-1.1
3,294,310	+				-0.7
3,294,505	+		Psyr_2712	0.28	-3.0
3,294,505	+		Psyr_2712	0.28	-0.3
3,294,505	+		Psyr_2712	0.28	+1.7
3,294,505	+		Psyr_2712	0.28	-2.1
3,294,505	+		Psyr_2712	0.28	-0.2
3,294,505	+		Psyr_2712	0.28	+2.3
3,294,505	+		Psyr_2712	0.28	-1.9
3,294,506	-		Psyr_2712	0.28	-0.9
3,294,506	-		Psyr_2712	0.28	-0.0
3,294,506	-		Psyr_2712	0.28	+0.2
3,294,506	-		Psyr_2712	0.28	+1.0
3,294,506	-		Psyr_2712	0.28	-0.7
3,294,524	-		Psyr_2712	0.31	+0.7
3,294,524	-		Psyr_2712	0.31	-0.3
3,294,583	+		Psyr_2712	0.39	+0.7
3,294,583	+		Psyr_2712	0.39	-0.2
3,294,583	+		Psyr_2712	0.39	-1.3
3,294,583	+		Psyr_2712	0.39	-1.5
3,294,583	+		Psyr_2712	0.39	-0.7
3,294,583	+		Psyr_2712	0.39	+1.7
3,294,583	+		Psyr_2712	0.39	-0.5
3,294,584	-		Psyr_2712	0.39	-0.1
3,294,584	-		Psyr_2712	0.39	-1.3
3,294,584	-		Psyr_2712	0.39	-0.3
3,294,584	-		Psyr_2712	0.39	+0.2
3,294,584	-		Psyr_2712	0.39	+0.1
3,294,643	+		Psyr_2712	0.48	-1.2
3,294,644	-		Psyr_2712	0.48	+0.7
3,294,644	-		Psyr_2712	0.48	-1.6
3,294,787	+		Psyr_2712	0.69	-0.3
3,294,787	+		Psyr_2712	0.69	-0.3
3,294,787	+		Psyr_2712	0.69	-0.7
3,294,787	+		Psyr_2712	0.69	+0.3
3,294,788	-		Psyr_2712	0.69	+0.3
3,294,788	-		Psyr_2712	0.69	-2.1
3,294,788	-		Psyr_2712	0.69	+2.0
3,294,788	-		Psyr_2712	0.69	-2.5
3,294,799	+		Psyr_2712	0.71	-0.3
3,294,799	+		Psyr_2712	0.71	+0.3
3,294,800	-		Psyr_2712	0.71	-1.2
3,294,800	-		Psyr_2712	0.71	+0.7
3,294,830	-		Psyr_2712	0.75	-1.5
3,295,103	+				+0.4
3,295,103	+				-0.9
3,295,116	+				-0.3
3,295,116	+				-0.5
3,295,117	-				+0.6
3,295,117	-				-0.3
3,295,117	-				+3.0
3,295,378	+		Psyr_2713	0.27	+0.1
3,295,378	+		Psyr_2713	0.27	+0.7
3,295,379	-				-1.6
3,295,379	-		Psyr_2713	0.27	-0.7
3,295,409	+		Psyr_2713	0.30	-0.3
3,295,453	+		Psyr_2713	0.35	+0.4
3,295,453	+		Psyr_2713	0.35	+0.4
3,295,454	-		Psyr_2713	0.35	+1.0
3,295,571	-		Psyr_2713	0.48	+0.9
3,295,614	-		Psyr_2713	0.53	-0.2
3,295,645	+		Psyr_2713	0.56	-0.2
3,295,645	+		Psyr_2713	0.56	-0.3
3,295,645	+		Psyr_2713	0.56	+0.3
3,295,645	+		Psyr_2713	0.56	+0.1
3,295,646	-		Psyr_2713	0.57	-0.2
3,295,646	-		Psyr_2713	0.57	+0.9
3,295,646	-		Psyr_2713	0.57	+0.3
3,295,646	-		Psyr_2713	0.57	+0.7
3,295,649	+		Psyr_2713	0.57	-1.3
3,295,649	+		Psyr_2713	0.57	-0.6
3,295,650	-		Psyr_2713	0.57	-0.3
3,295,650	-		Psyr_2713	0.57	-0.0
3,295,650	-		Psyr_2713	0.57	-0.7
3,295,650	-		Psyr_2713	0.57	+0.1
3,295,727	-		Psyr_2713	0.66	+0.5
3,295,921	-		Psyr_2713	0.87	-1.3