Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2639

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
3,205,831	+		Psyr_2638	0.64	+0.9
3,205,831	+		Psyr_2638	0.64	+0.6
3,205,831	+		Psyr_2638	0.64	+1.0
3,205,832	-		Psyr_2638	0.64	+2.0
3,205,832	-		Psyr_2638	0.64	+1.0
3,205,832	-		Psyr_2638	0.64	-0.9
3,205,832	-		Psyr_2638	0.64	-1.7
3,205,832	-		Psyr_2638	0.64	+1.5
3,205,832	-		Psyr_2638	0.64	-0.4
3,205,915	+		Psyr_2638	0.72	+1.0
3,205,915	+		Psyr_2638	0.72	+0.9
3,205,915	+		Psyr_2638	0.72	+0.5
3,205,915	+		Psyr_2638	0.72	+1.1
3,205,915	+		Psyr_2638	0.72	-0.4
3,205,915	+		Psyr_2638	0.72	-0.7
3,205,915	+		Psyr_2638	0.72	-1.4
3,205,915	+		Psyr_2638	0.72	-1.1
3,205,916	-		Psyr_2638	0.72	+0.1
3,205,916	-		Psyr_2638	0.72	-0.1
3,205,916	-		Psyr_2638	0.72	+1.6
3,205,916	-		Psyr_2638	0.72	-1.8
3,205,916	-		Psyr_2638	0.72	+1.9
3,205,916	-		Psyr_2638	0.72	+1.2
3,205,918	+		Psyr_2638	0.72	+1.4
3,205,918	+		Psyr_2638	0.72	+0.9
3,205,919	-		Psyr_2638	0.72	-1.7
3,205,919	-		Psyr_2638	0.72	-0.4
3,205,919	-		Psyr_2638	0.72	-1.7
3,205,919	-		Psyr_2638	0.72	+0.8
3,205,919	-		Psyr_2638	0.72	+0.2
3,205,999	+		Psyr_2638	0.79	+0.4
3,206,000	-		Psyr_2638	0.79	+1.2
3,206,053	+		Psyr_2638	0.84	+0.6
3,206,053	+		Psyr_2638	0.84	+1.2
3,206,053	+		Psyr_2638	0.84	+0.3
3,206,053	+		Psyr_2638	0.84	-1.6
3,206,053	+		Psyr_2638	0.84	+1.0
3,206,053	+		Psyr_2638	0.84	+0.3
3,206,053	+		Psyr_2638	0.84	-0.9
3,206,053	+		Psyr_2638	0.84	+0.1
3,206,053	+		Psyr_2638	0.84	-1.7
3,206,053	+		Psyr_2638	0.84	-1.5
3,206,054	-		Psyr_2638	0.85	+0.6
3,206,054	-		Psyr_2638	0.85	+0.3
3,206,054	-		Psyr_2638	0.85	-0.9
3,206,054	-		Psyr_2638	0.85	+1.1
3,206,054	-		Psyr_2638	0.85	-0.9
3,206,166	+				+0.6
3,206,213	+				+1.3
3,206,213	+				-0.4
3,206,213	+				-1.0
3,206,214	-				-1.2
3,206,214	-				-0.0
3,206,214	-				-3.2
3,206,214	-				-0.8
3,206,223	+				-1.3
3,206,223	+				-0.4
3,206,223	+				+0.1
3,206,223	+				+0.1
3,206,224	-				-0.4
3,206,231	-				-0.0
3,206,233	+				+0.4
3,206,244	+				+1.4
3,206,244	+				+0.8
3,206,245	-				-2.3
3,206,367	+				+0.6
3,206,368	-				-0.7
3,206,421	-				+1.4
3,206,457	+				-0.7
3,206,463	+				+2.2
3,206,604	+				-1.2
3,206,604	+				-0.8
3,206,605	-				+0.6
3,206,631	+				+1.2
3,206,631	+				-2.5
3,206,660	-				-1.8
3,206,690	+				-1.8
3,206,690	+				+0.2
3,206,691	-				-0.9
3,206,691	-				-4.1
3,206,696	+				-0.2
3,206,696	+				+0.2
3,206,696	+				-1.9
3,206,696	+				-0.5
3,206,697	-				-0.9
3,206,697	-				-1.2
3,206,773	-		Psyr_2639	0.15	-0.0
3,206,838	+		Psyr_2639	0.29	-0.9
3,206,839	-		Psyr_2639	0.30	-2.4
3,206,839	-		Psyr_2639	0.30	-2.4
3,206,842	+		Psyr_2639	0.30	-1.9
3,206,842	+		Psyr_2639	0.30	+0.9
3,206,843	-		Psyr_2639	0.31	-0.9
3,206,961	+		Psyr_2639	0.56	-0.2
3,206,962	-		Psyr_2639	0.56	-1.0
3,206,962	-		Psyr_2639	0.56	-0.2
3,206,962	-		Psyr_2639	0.56	-0.9
3,206,981	+		Psyr_2639	0.60	+1.1
3,207,065	+		Psyr_2639	0.78	-0.4
3,207,065	+		Psyr_2639	0.78	-0.9
3,207,065	+		Psyr_2639	0.78	+0.6
3,207,065	+		Psyr_2639	0.78	+0.1
3,207,065	+		Psyr_2639	0.78	-0.1
3,207,066	-		Psyr_2639	0.78	-1.4
3,207,066	-		Psyr_2639	0.78	-1.4
3,207,066	-		Psyr_2639	0.78	+0.5
3,207,066	-		Psyr_2639	0.78	-3.4
3,207,066	-		Psyr_2639	0.78	+0.6
3,207,066	-		Psyr_2639	0.78	-0.4
3,207,066	-		Psyr_2639	0.78	+0.5
3,207,066	-		Psyr_2639	0.78	-1.4
3,207,066	-		Psyr_2639	0.78	-0.8
3,207,066	-		Psyr_2639	0.78	-1.9
3,207,066	-		Psyr_2639	0.78	-0.4
3,207,066	-		Psyr_2639	0.78	+0.6
3,207,066	-		Psyr_2639	0.78	-0.4
3,207,082	+		Psyr_2639	0.82	-1.0
3,207,083	-		Psyr_2639	0.82	-0.4
3,207,162	-				-1.1
3,207,162	-				-1.1
3,207,230	-				-0.9
3,207,236	-				-1.9
3,207,288	-				-0.1
3,207,330	+				+2.2
3,207,330	+				-0.3
3,207,330	+				-1.4
3,207,331	-				+3.2
3,207,331	-				+1.8
3,207,410	+				+1.2
3,207,410	+				-1.5
3,207,453	+				+0.9
3,207,483	-				-1.1
3,207,483	-				-2.4
3,207,483	-				+1.2
3,207,495	+				+1.0
3,207,551	+				-0.2
3,207,630	+				-2.5
3,207,653	+				-0.4
3,207,654	-				+0.6
3,207,654	-				-1.7
3,207,654	-				+2.6
3,207,654	-				-0.4
3,207,660	+				-0.9
3,207,706	+				-0.4
3,207,707	-				+0.6
3,207,738	+				-0.4
3,207,757	+				-0.4
3,207,758	-				-0.5
3,207,758	-				+0.6
3,207,782	-				-1.2
3,207,782	-				-1.4
3,207,798	+				-0.3
3,207,888	+				-0.4
3,207,889	-				-1.0
3,207,903	+				-0.2
3,207,956	+				-0.8
3,207,956	+				-0.4
3,207,956	+				+2.6
3,207,957	-				-0.1
3,208,164	+		Psyr_2640	0.50	+0.9
3,208,165	-		Psyr_2640	0.50	-1.7
3,208,165	-		Psyr_2640	0.50	-1.2
3,208,165	-		Psyr_2640	0.50	+0.6