Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2218

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
2,576,945	+				+1.3
2,576,946	-				+1.4
2,577,625	+				+0.7
2,577,625	+				+0.3
2,577,625	+				+0.6
2,577,625	+				-0.9
2,577,626	-				-0.3
2,577,626	-				-0.7
2,577,637	+				-0.6
2,578,075	+		Psyr_2218	0.41	+0.5
2,578,076	-		Psyr_2218	0.42	-0.8
2,578,076	-		Psyr_2218	0.42	+0.1
2,578,079	+		Psyr_2218	0.42	+1.7
2,578,079	+		Psyr_2218	0.42	-0.4
2,578,079	+		Psyr_2218	0.42	+0.6
2,578,079	+		Psyr_2218	0.42	-0.7
2,578,159	+		Psyr_2218	0.51	+1.7
2,578,160	-				+0.7
2,578,160	-		Psyr_2218	0.51	+1.2
2,578,160	-		Psyr_2218	0.51	+0.5
2,578,319	+		Psyr_2218	0.69	+0.1
2,578,319	+		Psyr_2218	0.69	-0.2
2,578,319	+		Psyr_2218	0.69	+1.1
2,578,319	+		Psyr_2218	0.69	-0.5
2,578,319	+		Psyr_2218	0.69	+0.8
2,578,319	+		Psyr_2218	0.69	+0.5
2,578,319	+		Psyr_2218	0.69	+2.1
2,578,319	+		Psyr_2218	0.69	-0.4
2,578,320	-		Psyr_2218	0.69	+1.5
2,578,320	-		Psyr_2218	0.69	+0.1
2,578,320	-		Psyr_2218	0.69	+0.2
2,578,322	+		Psyr_2218	0.70	+1.1
2,578,322	+		Psyr_2218	0.70	-0.3
2,578,346	+		Psyr_2218	0.72	-0.4
2,578,347	-		Psyr_2218	0.72	+1.7
2,578,347	-		Psyr_2218	0.72	+2.3
2,578,347	-		Psyr_2218	0.72	+1.0
2,578,347	-		Psyr_2218	0.72	+0.7
2,578,499	+		Psyr_2218	0.90	-0.6
2,578,500	-				+0.3
2,578,500	-				+0.1
2,578,629	+				-1.3
2,578,629	+				-0.6
2,578,630	-				-0.3
2,578,682	-				-1.2
2,578,683	+				-0.8
2,578,777	-				-0.3
2,578,777	-		Psyr_2219	0.15	+0.4
2,579,153	+		Psyr_2219	0.55	-0.9
2,579,153	+		Psyr_2219	0.55	-1.9
2,579,153	+		Psyr_2219	0.55	-0.7
2,579,153	+		Psyr_2219	0.55	+0.9
2,579,153	+		Psyr_2219	0.55	+0.0
2,579,154	-		Psyr_2219	0.55	-1.1
2,579,154	-		Psyr_2219	0.55	-1.3
2,579,154	-		Psyr_2219	0.55	+1.4
2,579,154	-		Psyr_2219	0.55	-1.0
2,579,256	+		Psyr_2219	0.65	-0.2
2,579,257	-		Psyr_2219	0.65	-1.3
2,579,269	+		Psyr_2219	0.67	+0.9
2,579,270	-		Psyr_2219	0.67	+0.5
2,579,504	-				+0.5
2,579,504	-				+0.4
2,579,504	-				-0.3
2,579,584	+				+0.2
2,579,585	-				+0.3
2,579,585	-				+0.4
2,579,585	-				-0.3
2,579,585	-				+1.9
2,579,585	-				-0.6