Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2084

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
2,428,765	+				-0.9
2,428,827	-				+0.8
2,428,827	-				+0.4
2,428,827	-				+0.1
2,428,827	-				-0.3
2,428,844	+				+0.7
2,428,845	-				-1.6
2,428,892	+				+0.7
2,428,893	-				-0.1
2,428,893	-				-1.6
2,428,896	+				-0.8
2,428,896	+				+0.5
2,428,896	+				+0.7
2,428,897	-		Psyr_2083	0.10	-0.4
2,428,897	-		Psyr_2083	0.10	+0.9
2,428,897	-		Psyr_2083	0.10	-1.0
2,428,993	+		Psyr_2083	0.28	+0.1
2,428,993	+		Psyr_2083	0.28	+0.1
2,428,993	+		Psyr_2083	0.28	+0.4
2,428,993	+		Psyr_2083	0.28	+0.6
2,428,993	+		Psyr_2083	0.28	+0.1
2,428,993	+		Psyr_2083	0.28	-0.8
2,428,993	+		Psyr_2083	0.28	-1.1
2,428,994	-		Psyr_2083	0.28	-2.9
2,428,994	-		Psyr_2083	0.28	+1.2
2,428,994	-		Psyr_2083	0.28	+0.3
2,428,994	-		Psyr_2083	0.28	-1.6
2,428,994	-		Psyr_2083	0.28	-1.3
2,428,994	-		Psyr_2083	0.28	-0.3
2,429,134	+		Psyr_2083	0.54	+0.7
2,429,134	+		Psyr_2083	0.54	-2.1
2,429,134	+		Psyr_2083	0.54	+1.1
2,429,134	+		Psyr_2083	0.54	-0.2
2,429,134	+		Psyr_2083	0.54	+2.3
2,429,134	+		Psyr_2083	0.54	+2.7
2,429,134	+		Psyr_2083	0.54	-1.6
2,429,134	+		Psyr_2083	0.54	-0.3
2,429,134	+		Psyr_2083	0.54	+1.4
2,429,134	+		Psyr_2083	0.54	-0.5
2,429,134	+		Psyr_2083	0.54	+0.9
2,429,134	+		Psyr_2083	0.54	+0.9
2,429,134	+		Psyr_2083	0.54	-0.4
2,429,134	+		Psyr_2083	0.54	+0.7
2,429,134	+		Psyr_2083	0.54	+0.7
2,429,135	-		Psyr_2083	0.54	-0.3
2,429,135	-		Psyr_2083	0.54	-0.1
2,429,135	-		Psyr_2083	0.54	-0.3
2,429,135	-		Psyr_2083	0.54	-0.9
2,429,135	-		Psyr_2083	0.54	+0.1
2,429,135	-		Psyr_2083	0.54	-2.8
2,429,159	+		Psyr_2083	0.59	+0.1
2,429,160	-		Psyr_2083	0.59	-0.6
2,429,285	+		Psyr_2083	0.82	+0.4
2,429,286	-		Psyr_2083	0.82	+0.2
2,429,286	-		Psyr_2083	0.82	+0.0
2,429,301	-		Psyr_2083	0.85	-0.9
2,429,301	-		Psyr_2083	0.85	+0.1
2,429,379	+				+0.7
2,429,379	+				+0.7
2,429,379	+				-0.1
2,429,379	+				-1.9
2,429,380	-				+0.3
2,429,445	+				-0.9
2,429,445	+				+0.1
2,429,509	+				-0.9
2,429,509	+				-1.2
2,429,509	+				-0.4
2,429,510	-				+0.8
2,429,510	-				-1.4
2,429,510	-				-0.9
2,429,510	-				-1.9
2,429,636	+				+1.2
2,429,636	+				+0.8
2,429,636	+				+0.2
2,429,636	+				-1.3
2,429,636	+				+1.7
2,429,636	+				-0.2
2,429,636	+				+1.0
2,429,636	+				-0.4
2,429,636	+				+0.7
2,429,636	+				-0.4
2,429,636	+				+0.4
2,429,636	+				-0.6
2,429,636	+				+0.1
2,429,636	+				+0.7
2,429,636	+				-0.5
2,429,637	-				+0.7
2,429,637	-				-1.7
2,429,637	-				-0.6
2,429,637	-				+0.4
2,429,637	-				-0.9
2,429,751	+		Psyr_2084	0.10	-0.0
2,429,751	+		Psyr_2084	0.10	-1.1
2,429,752	-		Psyr_2084	0.10	+0.1
2,429,825	-		Psyr_2084	0.21	-0.9
2,429,825	-		Psyr_2084	0.21	-1.5
2,429,825	-		Psyr_2084	0.21	+0.3
2,430,079	-		Psyr_2084	0.56	-0.8
2,430,197	-		Psyr_2084	0.72	-0.9
2,430,440	+				-0.3
2,430,521	+		Psyr_2085	0.14	+0.4
2,430,522	-		Psyr_2085	0.14	-0.7
2,430,525	+		Psyr_2085	0.15	+1.1
2,430,525	+		Psyr_2085	0.15	-1.6
2,430,525	+		Psyr_2085	0.15	+0.7
2,430,525	+		Psyr_2085	0.15	-0.1
2,430,525	+		Psyr_2085	0.15	+0.3
2,430,526	-		Psyr_2085	0.15	-0.6
2,430,526	-		Psyr_2085	0.15	+1.4
2,430,598	+		Psyr_2085	0.23	-0.1
2,430,599	-		Psyr_2085	0.23	+1.0
2,430,599	-		Psyr_2085	0.23	-0.3
2,430,930	-		Psyr_2085	0.60	+1.0
2,430,948	-		Psyr_2085	0.62	-1.3
2,430,984	+		Psyr_2085	0.66	-0.3
2,430,984	+		Psyr_2085	0.66	+0.4
2,430,984	+		Psyr_2085	0.66	-2.1
2,430,985	-		Psyr_2085	0.66	-1.8
2,431,059	-		Psyr_2085	0.74	-0.7
2,431,218	+				-0.9
2,431,219	-				-0.3
2,431,219	-				-0.9
2,431,352	+				+1.2
2,431,352	+				+0.1
2,431,353	-				-0.6
2,431,382	+				-1.6