Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1781

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
2,028,773	+				-0.1
2,028,773	+				+0.4
2,028,773	+				-0.0
2,028,774	-				-0.1
2,028,871	+				+1.3
2,028,871	+				+0.1
2,028,871	+				-1.1
2,028,871	+				+0.6
2,028,871	+				-0.3
2,028,871	+				-0.1
2,028,872	-				-2.1
2,028,872	-				+1.2
2,028,872	-				+0.9
2,028,872	-				-1.5
2,028,872	-				+0.9
2,028,872	-				-0.1
2,028,872	-				-1.0
2,028,886	-				-0.6
2,028,899	-				+0.5
2,028,992	+		Psyr_1780	0.19	-0.7
2,029,112	+		Psyr_1780	0.38	-0.9
2,029,113	-		Psyr_1780	0.38	+0.7
2,029,113	-		Psyr_1780	0.38	-0.3
2,029,452	+				-0.9
2,029,452	+				+0.7
2,029,453	-				-0.3
2,029,523	+				+0.0
2,029,524	-				+0.3
2,029,583	+				+0.0
2,029,586	+				-2.6
2,029,587	-				+0.1
2,029,679	-				+0.1
2,029,679	-				+1.7
2,029,775	+				-0.8
2,029,775	+				+2.1
2,029,775	+				+0.3
2,029,779	-				-0.8
2,029,839	-				-0.6
2,029,904	+		Psyr_1781	0.12	+0.2
2,029,904	+		Psyr_1781	0.12	+0.3
2,029,904	+		Psyr_1781	0.12	-1.3
2,029,904	+		Psyr_1781	0.12	+1.5
2,029,904	+		Psyr_1781	0.12	+0.3
2,029,905	-		Psyr_1781	0.12	-2.4
2,029,905	-		Psyr_1781	0.12	-0.0
2,030,016	-		Psyr_1781	0.16	-0.4
2,030,021	+		Psyr_1781	0.16	-0.5
2,030,021	+		Psyr_1781	0.16	+0.6
2,030,021	+		Psyr_1781	0.16	+0.5
2,030,022	-		Psyr_1781	0.16	-0.6
2,030,022	-		Psyr_1781	0.16	-1.0
2,030,022	-		Psyr_1781	0.16	+1.7
2,030,031	-		Psyr_1781	0.17	-0.1
2,030,031	-		Psyr_1781	0.17	-0.3
2,030,031	-		Psyr_1781	0.17	+0.3
2,030,114	+		Psyr_1781	0.20	+0.4
2,030,115	-		Psyr_1781	0.20	-1.0
2,030,115	-		Psyr_1781	0.20	-2.8
2,030,150	+		Psyr_1781	0.21	-1.8
2,030,150	+		Psyr_1781	0.21	-1.4
2,030,151	-		Psyr_1781	0.21	+0.7
2,030,151	-		Psyr_1781	0.21	+0.9
2,030,151	-		Psyr_1781	0.21	+0.2
2,030,172	-		Psyr_1781	0.22	+0.2
2,030,180	+		Psyr_1781	0.22	-0.3
2,030,180	+		Psyr_1781	0.22	+0.7
2,030,180	+		Psyr_1781	0.22	-1.7
2,030,181	-		Psyr_1781	0.22	+0.3
2,030,181	-		Psyr_1781	0.22	+0.6
2,030,181	-		Psyr_1781	0.22	-1.0
2,030,254	+		Psyr_1781	0.25	+0.2
2,030,254	+		Psyr_1781	0.25	-1.5
2,030,254	+		Psyr_1781	0.25	-0.3
2,030,255	-		Psyr_1781	0.25	+0.9
2,030,363	-		Psyr_1781	0.29	+1.1
2,030,498	+		Psyr_1781	0.34	-1.8
2,030,498	+		Psyr_1781	0.34	-0.7
2,030,567	-		Psyr_1781	0.36	+0.2
2,030,616	-		Psyr_1781	0.38	+0.2
2,030,734	-		Psyr_1781	0.42	-0.5
2,030,736	-		Psyr_1781	0.42	+2.7
2,030,946	+		Psyr_1781	0.50	+0.0
2,030,951	+		Psyr_1781	0.50	+0.7
2,030,951	+		Psyr_1781	0.50	-0.4
2,030,951	+		Psyr_1781	0.50	+1.2
2,030,952	-		Psyr_1781	0.50	+1.7
2,030,952	-		Psyr_1781	0.50	+0.9
2,030,954	+		Psyr_1781	0.50	+1.3
2,030,955	-		Psyr_1781	0.50	+1.6
2,030,955	-		Psyr_1781	0.50	+0.3
2,030,965	+		Psyr_1781	0.51	+1.2
2,030,965	+		Psyr_1781	0.51	-0.8
2,030,966	-		Psyr_1781	0.51	+0.0
2,031,107	+		Psyr_1781	0.56	+0.9
2,031,107	+		Psyr_1781	0.56	+0.7
2,031,107	+		Psyr_1781	0.56	+0.5
2,031,107	+		Psyr_1781	0.56	+0.2
2,031,107	+		Psyr_1781	0.56	+1.7
2,031,107	+		Psyr_1781	0.56	+1.3
2,031,107	+		Psyr_1781	0.56	+1.4
2,031,108	-		Psyr_1781	0.56	-1.4
2,031,108	-		Psyr_1781	0.56	+0.9
2,031,108	-		Psyr_1781	0.56	-1.1
2,031,108	-		Psyr_1781	0.56	+0.6
2,031,108	-		Psyr_1781	0.56	+0.9
2,031,108	-		Psyr_1781	0.56	-1.3
2,031,108	-		Psyr_1781	0.56	+1.3
2,031,108	-		Psyr_1781	0.56	+0.6
2,031,108	-		Psyr_1781	0.56	+0.4
2,031,108	-		Psyr_1781	0.56	+0.7
2,031,108	-		Psyr_1781	0.56	+2.6
2,031,125	+		Psyr_1781	0.57	-0.4
2,031,382	+		Psyr_1781	0.66	+0.6
2,031,416	+		Psyr_1781	0.67	+0.7
2,031,416	+		Psyr_1781	0.67	+0.0
2,031,416	+		Psyr_1781	0.67	+0.7
2,031,416	+		Psyr_1781	0.67	+0.7
2,031,417	-		Psyr_1781	0.67	+1.4
2,031,417	-		Psyr_1781	0.67	-1.2
2,031,671	+		Psyr_1781	0.77	-1.4
2,031,672	-		Psyr_1781	0.77	+1.0
2,031,672	-		Psyr_1781	0.77	+1.5
2,031,697	+		Psyr_1781	0.78	+0.3
2,031,697	+		Psyr_1781	0.78	+0.3
2,031,698	-		Psyr_1781	0.78	+1.1
2,031,698	-		Psyr_1781	0.78	-0.3
2,031,808	+		Psyr_1781	0.82	-0.5
2,031,842	+		Psyr_1781	0.83	+1.6
2,031,842	+		Psyr_1781	0.83	+0.3
2,031,843	-		Psyr_1781	0.83	+0.2
2,031,843	-		Psyr_1781	0.83	-0.3
2,031,843	-		Psyr_1781	0.83	-0.4
2,031,843	-				-0.3
2,031,843	-		Psyr_1781	0.83	+0.7
2,032,033	+				-0.4
2,032,034	-				+1.2
2,032,284	+				-0.3
2,032,291	+				-1.1
2,032,291	+				+0.7
2,032,292	-				+1.7
2,032,292	-				+0.7
2,032,292	-				-0.3
2,032,546	-		Psyr_1782	0.86	-0.9
2,032,603	+				-0.6
2,032,603	+				+0.7
2,032,604	-				+0.0
2,032,604	-				+1.1
2,033,010	+		Psyr_1783	0.27	+0.2
2,033,101	+		Psyr_1783	0.63	+1.3
2,033,102	-		Psyr_1783	0.64	-1.8
2,033,130	+		Psyr_1783	0.75	+1.7
2,033,130	+		Psyr_1783	0.75	+0.4
2,033,131	-		Psyr_1783	0.75	-1.7
2,033,131	-		Psyr_1783	0.75	-2.7
2,033,131	-		Psyr_1783	0.75	+0.2
2,033,190	+				+1.1
2,033,258	+				+0.4
2,033,259	-				-0.3
2,033,277	-				+1.0
2,033,277	-				+0.5