Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1382

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
1,565,023	-		Psyr_1380	0.89	+1.9
1,565,132	+				+1.5
1,565,132	+				+0.0
1,565,132	+				-0.7
1,565,132	+				+1.0
1,565,132	+				+0.0
1,565,132	+				+0.3
1,565,132	+				+0.6
1,565,132	+				-0.5
1,565,132	+				-1.9
1,565,132	+				-0.7
1,565,132	+				-0.2
1,565,133	-				-0.7
1,565,133	-				+0.5
1,565,133	-				+0.9
1,565,133	-				-0.5
1,565,133	-				+1.1
1,565,133	-				+0.5
1,565,133	-				-0.5
1,565,133	-				+0.5
1,565,133	-				-0.4
1,565,136	+				-0.7
1,565,136	+				+1.9
1,565,136	+				+0.4
1,565,136	+				+0.9
1,565,136	+				+0.7
1,565,136	+				-0.3
1,565,137	-				-0.9
1,565,137	-				+0.4
1,565,275	-				-0.1
1,565,320	+				+1.1
1,565,320	+				-0.4
1,565,320	+				+0.5
1,565,320	+				+0.6
1,565,320	+				+0.5
1,565,320	+				-0.9
1,565,320	+				-2.1
1,565,321	-				-0.3
1,565,321	-				-0.1
1,565,321	-				+0.5
1,565,321	-				+0.6
1,565,321	-				+1.2
1,565,321	-				-0.8
1,565,321	-				+0.5
1,565,321	-				+2.5
1,565,321	-				+0.5
1,565,338	+				-1.8
1,565,339	-				+0.1
1,565,352	+				+0.1
1,565,353	-				+0.1
1,565,353	-				-1.0
1,565,407	+		Psyr_1381	0.17	-0.0
1,565,407	+		Psyr_1381	0.17	-0.7
1,565,408	-		Psyr_1381	0.17	+0.5
1,565,422	+		Psyr_1381	0.20	+1.0
1,565,422	+		Psyr_1381	0.20	+0.7
1,565,422	+		Psyr_1381	0.20	+0.4
1,565,423	-		Psyr_1381	0.21	-1.1
1,565,423	-		Psyr_1381	0.21	+1.3
1,565,431	-		Psyr_1381	0.23	+1.9
1,565,585	-		Psyr_1381	0.59	+0.2
1,565,585	-		Psyr_1381	0.59	+0.2
1,565,755	-				+0.5
1,565,768	+				+2.5
1,565,768	+				+0.1
1,565,769	-				+1.0
1,565,769	-				+0.9
1,565,769	-				+1.0
1,565,851	+				+0.3
1,565,852	-				+0.3
1,565,852	-				+0.6
1,565,853	+				+2.2
1,565,853	+				+0.2
1,565,854	-				+0.2
1,565,854	-				+0.1
1,565,854	-				+0.7
1,565,854	-				-0.4
1,565,854	-				-1.7
1,565,854	-				-1.3
1,565,854	-				-0.1
1,565,937	+				-0.2
1,565,953	+				+0.1
1,565,983	+				+1.2
1,565,983	+				+0.0
1,565,983	+				-0.7
1,565,983	+				+0.1
1,565,983	+				+0.4
1,565,983	+				-0.2
1,565,983	+				-0.7
1,565,983	+				-0.4
1,565,983	+				-1.8
1,565,984	-				-0.0
1,565,984	-				+1.0
1,565,984	-				+0.2
1,565,984	-				+0.3
1,565,984	-				+1.0
1,565,984	-				-1.1
1,566,069	-				-0.1
1,566,069	-				-1.5
1,566,123	+		Psyr_1382	0.16	+0.7
1,566,123	+		Psyr_1382	0.16	-0.4
1,566,123	+		Psyr_1382	0.16	-2.7
1,566,123	+		Psyr_1382	0.16	+1.1
1,566,124	-		Psyr_1382	0.16	+0.5
1,566,124	-		Psyr_1382	0.16	+2.0
1,566,124	-		Psyr_1382	0.16	+0.7
1,566,183	+		Psyr_1382	0.24	+0.3
1,566,183	+		Psyr_1382	0.24	+0.5
1,566,183	+		Psyr_1382	0.24	+0.9
1,566,183	+		Psyr_1382	0.24	+0.2
1,566,183	+		Psyr_1382	0.24	+0.3
1,566,183	+		Psyr_1382	0.24	+0.4
1,566,183	+		Psyr_1382	0.24	+0.9
1,566,183	+		Psyr_1382	0.24	+0.9
1,566,183	+		Psyr_1382	0.24	-0.5
1,566,183	+		Psyr_1382	0.24	-0.3
1,566,183	+		Psyr_1382	0.24	-0.5
1,566,183	+		Psyr_1382	0.24	-0.1
1,566,184	-		Psyr_1382	0.25	+0.1
1,566,184	-		Psyr_1382	0.25	+0.7
1,566,184	-		Psyr_1382	0.25	+0.3
1,566,184	-		Psyr_1382	0.25	+0.6
1,566,184	-		Psyr_1382	0.25	+0.2
1,566,184	-		Psyr_1382	0.25	+0.2
1,566,184	-		Psyr_1382	0.25	+0.7
1,566,184	-		Psyr_1382	0.25	+0.9
1,566,184	-		Psyr_1382	0.25	+0.6
1,566,184	-		Psyr_1382	0.25	-0.7
1,566,324	+		Psyr_1382	0.44	+0.6
1,566,324	+		Psyr_1382	0.44	-0.1
1,566,324	+		Psyr_1382	0.44	-0.0
1,566,324	+		Psyr_1382	0.44	+0.4
1,566,325	-		Psyr_1382	0.44	+0.9
1,566,325	-		Psyr_1382	0.44	+1.1
1,566,621	+		Psyr_1382	0.86	+0.5
1,566,621	+		Psyr_1382	0.86	+0.9
1,566,621	+		Psyr_1382	0.86	-0.5
1,566,622	-		Psyr_1382	0.86	-0.9
1,566,645	+		Psyr_1382	0.89	+0.1
1,566,645	+		Psyr_1382	0.89	-0.3
1,566,646	-		Psyr_1382	0.90	+0.4
1,566,774	+				+1.6
1,566,774	+				+0.5
1,566,774	+				+1.0
1,566,774	+				-0.9
1,566,774	+				+1.7
1,566,774	+				+0.8
1,566,774	+				-0.1
1,566,774	+				+1.2
1,566,774	+				-0.5
1,566,774	+				+2.0
1,566,774	+				+0.4
1,566,774	+				+1.9
1,566,774	+				+0.4
1,566,774	+				-0.5
1,566,774	+				-0.1
1,566,774	+				+0.3
1,566,774	+				+0.3
1,566,775	-				+0.4
1,566,775	-				+3.2
1,566,775	-				+0.1
1,566,775	-				+0.0
1,566,775	-				+0.6
1,566,775	-				-1.5
1,566,775	-				+0.3
1,566,775	-				-0.7
1,566,775	-				+0.9
1,566,775	-				-0.8
1,566,961	+				-2.3
1,566,961	+				-0.5
1,566,961	+				+0.2
1,566,961	+				-1.2
1,566,961	+				-0.4
1,566,961	+				-1.7
1,566,961	+				+1.1
1,566,961	+				+0.1
1,566,962	-				-2.1
1,566,962	-				-0.9
1,566,962	-				-0.6
1,566,962	-				-1.0
1,566,962	-				-0.5
1,566,962	-				+0.4
1,566,962	-				+0.9
1,566,962	-				+0.0
1,566,962	-				+0.1
1,566,962	-				-1.2
1,566,962	-				-0.7
1,566,962	-				-1.1
1,566,970	+				-0.3
1,566,971	-				+0.2
1,566,971	-				-0.0
1,566,971	-				-0.4
1,566,971	-				-0.6
1,567,580	+				+0.5
1,567,581	-				-1.5
1,567,651	+				+0.2
1,567,652	-				+0.7
1,567,652	-				+1.2
1,567,660	-				-0.1
1,567,694	+				-1.7
1,567,694	+				+0.7
1,567,694	+				-0.1
1,567,694	+				-0.1
1,567,694	+				-0.4
1,567,694	+				+1.1
1,567,695	-				+0.1
1,567,695	-				+0.2
1,567,695	-				-1.0
1,567,695	-				+1.0
1,567,695	-				-0.1
1,567,695	-				+0.9
1,567,695	-				+1.5