Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1249 and Psyr_1250 are separated by 39 nucleotides Psyr_1250 and Psyr_1251 are separated by 1 nucleotides
Psyr_1249: Psyr_1249 - histidyl-tRNA synthetase, at 1,404,477 to 1,405,766
_1249
Psyr_1250: Psyr_1250 - conserved hypothetical protein, at 1,405,806 to 1,406,447
_1250
Psyr_1251: Psyr_1251 - quinoprotein, at 1,406,449 to 1,407,594
_1251
Position (kb) 1405
1406
1407 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1405.230 kb on + strand, within Psyr_1249 at 1405.230 kb on + strand, within Psyr_1249 at 1405.230 kb on + strand, within Psyr_1249 at 1405.230 kb on + strand, within Psyr_1249 at 1405.266 kb on + strand, within Psyr_1249 at 1405.269 kb on + strand, within Psyr_1249 at 1405.476 kb on + strand, within Psyr_1249 at 1405.712 kb on + strand at 1405.712 kb on + strand at 1405.775 kb on + strand at 1405.799 kb on + strand at 1405.932 kb on + strand, within Psyr_1250 at 1406.073 kb on + strand, within Psyr_1250 at 1406.073 kb on + strand, within Psyr_1250 at 1406.349 kb on + strand, within Psyr_1250 at 1406.349 kb on + strand, within Psyr_1250 at 1406.617 kb on + strand, within Psyr_1251 at 1406.656 kb on + strand, within Psyr_1251 at 1406.656 kb on + strand, within Psyr_1251 at 1406.656 kb on + strand, within Psyr_1251 at 1406.764 kb on + strand, within Psyr_1251 at 1407.184 kb on + strand, within Psyr_1251 at 1407.196 kb on + strand, within Psyr_1251 at 1407.298 kb on + strand, within Psyr_1251 at 1407.298 kb on + strand, within Psyr_1251 at 1407.406 kb on + strand, within Psyr_1251 at 1407.415 kb on + strand, within Psyr_1251
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 1,405,230 + Psyr_1249 0.58 +0.9 1,405,230 + Psyr_1249 0.58 -2.0 1,405,230 + Psyr_1249 0.58 -0.1 1,405,230 + Psyr_1249 0.58 -0.1 1,405,266 + Psyr_1249 0.61 +0.9 1,405,269 + Psyr_1249 0.61 -0.7 1,405,476 + Psyr_1249 0.77 -1.1 1,405,712 + -1.1 1,405,712 + -0.3 1,405,775 + +2.0 1,405,799 + -1.1 1,405,932 + Psyr_1250 0.20 +0.9 1,406,073 + Psyr_1250 0.42 -1.3 1,406,073 + Psyr_1250 0.42 -1.1 1,406,349 + Psyr_1250 0.85 -2.1 1,406,349 + Psyr_1250 0.85 -0.1 1,406,617 + Psyr_1251 0.15 +2.2 1,406,656 + Psyr_1251 0.18 +0.3 1,406,656 + Psyr_1251 0.18 +0.5 1,406,656 + Psyr_1251 0.18 -1.0 1,406,764 + Psyr_1251 0.27 -0.7 1,407,184 + Psyr_1251 0.64 +0.1 1,407,196 + Psyr_1251 0.65 -1.1 1,407,298 + Psyr_1251 0.74 +0.9 1,407,298 + Psyr_1251 0.74 -0.5 1,407,406 + Psyr_1251 0.84 -0.7 1,407,415 + Psyr_1251 0.84 +0.0
Or see this region's nucleotide sequence