Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4746

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
5,480,271	+		Pf6N2E2_4744	0.56	+0.2
5,480,272	-		Pf6N2E2_4744	0.56	+1.6
5,480,272	-		Pf6N2E2_4744	0.56	+1.8
5,480,272	-		Pf6N2E2_4744	0.56	+0.3
5,480,449	+		Pf6N2E2_4744	0.72	-0.4
5,480,449	+		Pf6N2E2_4744	0.72	+0.2
5,480,450	-		Pf6N2E2_4744	0.72	+0.8
5,480,710	+				-0.8
5,480,711	-				-0.1
5,480,812	+				-1.6
5,480,812	+				+0.6
5,480,812	+				-0.1
5,480,813	-				+0.3
5,480,813	-				+0.4
5,481,046	+				+0.3
5,481,046	+				+1.3
5,481,049	+				-0.6
5,481,049	+				-0.0
5,481,049	+				+1.1
5,481,050	-				-0.2
5,481,055	+				+0.6
5,481,055	+				+0.9
5,481,056	-				+0.1
5,481,056	-				-0.2
5,481,079	+				-0.0
5,481,079	+				+0.5
5,481,079	+				-0.8
5,481,080	-				-1.2
5,481,080	-				+0.3
5,481,080	-				+0.1
5,481,157	+				-1.2
5,481,157	+				-0.4
5,481,175	+				+0.4
5,481,176	-				-0.1
5,481,176	-				-1.6
5,481,176	-				-1.2
5,481,176	-				+0.4
5,481,182	+				+0.2
5,481,182	+				+0.3
5,481,184	+				+0.2
5,481,184	+				+0.3
5,481,184	+				-1.4
5,481,184	+				+1.3
5,481,184	+				+0.8
5,481,184	+				-0.6
5,481,184	+				+0.7
5,481,184	+				-0.3
5,481,184	+				+2.0
5,481,184	+				+0.5
5,481,185	-				-0.5
5,481,185	-				+0.2
5,481,185	-				-1.4
5,481,185	-				-0.9
5,481,185	-				+0.6
5,481,226	+				-0.3
5,481,226	+				+1.3
5,481,226	+				+0.5
5,481,226	+				+0.1
5,481,227	-				-0.7
5,481,227	-				-0.1
5,481,227	-				+0.1
5,481,227	-				+1.2
5,481,241	+				+0.4
5,481,241	+				-1.8
5,481,241	+				+0.7
5,481,241	+				-0.4
5,481,242	-				+0.8
5,481,242	-				+0.8
5,481,242	-				+0.0
5,481,242	-				-0.8
5,481,242	-				-1.5
5,481,242	-				+0.3
5,481,242	-				-0.6
5,481,296	-		Pf6N2E2_4746	0.12	-0.8
5,481,296	-		Pf6N2E2_4746	0.12	-0.2
5,481,296	-		Pf6N2E2_4746	0.12	+0.5
5,481,388	+		Pf6N2E2_4746	0.16	-0.8
5,481,388	+		Pf6N2E2_4746	0.16	-0.5
5,481,388	+		Pf6N2E2_4746	0.16	-2.6
5,481,388	+		Pf6N2E2_4746	0.16	+0.4
5,481,389	-		Pf6N2E2_4746	0.16	+1.6
5,481,389	-		Pf6N2E2_4746	0.16	+0.4
5,481,389	-		Pf6N2E2_4746	0.16	+0.3
5,481,389	-		Pf6N2E2_4746	0.16	+0.8
5,481,394	+		Pf6N2E2_4746	0.16	-0.6
5,481,394	+		Pf6N2E2_4746	0.16	-0.4
5,481,394	+		Pf6N2E2_4746	0.16	-0.1
5,481,394	+		Pf6N2E2_4746	0.16	-1.0
5,481,394	+		Pf6N2E2_4746	0.16	-1.4
5,481,395	-		Pf6N2E2_4746	0.16	+0.3
5,481,395	-		Pf6N2E2_4746	0.16	+1.4
5,481,395	-		Pf6N2E2_4746	0.16	+0.2
5,481,395	-		Pf6N2E2_4746	0.16	+0.1
5,481,457	-		Pf6N2E2_4746	0.19	-0.4
5,481,462	+		Pf6N2E2_4746	0.19	+0.2
5,481,462	+		Pf6N2E2_4746	0.19	-0.2
5,481,462	+		Pf6N2E2_4746	0.19	-0.3
5,481,462	+		Pf6N2E2_4746	0.19	+0.3
5,481,463	-		Pf6N2E2_4746	0.19	-1.2
5,481,463	-		Pf6N2E2_4746	0.19	+0.5
5,481,463	-		Pf6N2E2_4746	0.19	-1.4
5,481,568	+		Pf6N2E2_4746	0.23	-0.2
5,481,568	+		Pf6N2E2_4746	0.23	+1.1
5,481,568	+		Pf6N2E2_4746	0.23	+0.4
5,481,569	-		Pf6N2E2_4746	0.23	+0.2
5,481,569	-		Pf6N2E2_4746	0.23	-0.4
5,481,569	-		Pf6N2E2_4746	0.23	+0.5
5,481,569	-		Pf6N2E2_4746	0.23	-1.9
5,481,673	+		Pf6N2E2_4746	0.28	+2.0
5,481,700	+		Pf6N2E2_4746	0.29	+1.0
5,481,700	+		Pf6N2E2_4746	0.29	+0.5
5,481,850	+		Pf6N2E2_4746	0.35	+0.2
5,481,850	+		Pf6N2E2_4746	0.35	+0.0
5,481,850	+		Pf6N2E2_4746	0.35	-0.4
5,481,850	+		Pf6N2E2_4746	0.35	+0.8
5,481,850	+		Pf6N2E2_4746	0.35	-0.0
5,481,851	-		Pf6N2E2_4746	0.35	-0.3
5,481,851	-		Pf6N2E2_4746	0.35	+0.9
5,481,880	+		Pf6N2E2_4746	0.36	+0.2
5,481,880	+		Pf6N2E2_4746	0.36	-0.1
5,481,880	+		Pf6N2E2_4746	0.36	+0.5
5,481,880	+		Pf6N2E2_4746	0.36	-0.7
5,481,881	-		Pf6N2E2_4746	0.36	+1.3
5,481,881	-		Pf6N2E2_4746	0.36	+0.9
5,481,886	+		Pf6N2E2_4746	0.37	+0.1
5,481,886	+		Pf6N2E2_4746	0.37	-0.6
5,481,886	+		Pf6N2E2_4746	0.37	-0.0
5,481,886	+		Pf6N2E2_4746	0.37	+0.3
5,481,886	+		Pf6N2E2_4746	0.37	+0.3
5,481,886	+		Pf6N2E2_4746	0.37	+0.4
5,481,886	+		Pf6N2E2_4746	0.37	-0.4
5,481,886	+		Pf6N2E2_4746	0.37	+0.1
5,481,886	+		Pf6N2E2_4746	0.37	-0.3
5,481,886	+		Pf6N2E2_4746	0.37	-2.0
5,481,887	-		Pf6N2E2_4746	0.37	-0.8
5,481,887	-		Pf6N2E2_4746	0.37	-0.4
5,481,887	-		Pf6N2E2_4746	0.37	+0.3
5,481,887	-		Pf6N2E2_4746	0.37	-0.2
5,481,887	-		Pf6N2E2_4746	0.37	+0.0
5,481,887	-		Pf6N2E2_4746	0.37	-0.1
5,481,887	-		Pf6N2E2_4746	0.37	+0.1
5,481,887	-		Pf6N2E2_4746	0.37	-0.9
5,481,899	-		Pf6N2E2_4746	0.37	+0.3
5,481,899	-		Pf6N2E2_4746	0.37	-1.7
5,481,899	-		Pf6N2E2_4746	0.37	+0.3
5,481,925	+		Pf6N2E2_4746	0.38	-2.5
5,481,926	-		Pf6N2E2_4746	0.38	-2.0
5,481,926	-		Pf6N2E2_4746	0.38	+1.3
5,482,014	+		Pf6N2E2_4746	0.42	-1.5
5,482,015	-		Pf6N2E2_4746	0.42	+0.8
5,482,015	-		Pf6N2E2_4746	0.42	-0.7
5,482,124	+		Pf6N2E2_4746	0.46	-0.4
5,482,124	+		Pf6N2E2_4746	0.46	+0.1
5,482,137	+		Pf6N2E2_4746	0.47	+1.1
5,482,137	+		Pf6N2E2_4746	0.47	+0.6
5,482,137	+		Pf6N2E2_4746	0.47	+0.3
5,482,138	-		Pf6N2E2_4746	0.47	+0.1
5,482,138	-		Pf6N2E2_4746	0.47	+0.8
5,482,138	-		Pf6N2E2_4746	0.47	-0.7
5,482,199	+		Pf6N2E2_4746	0.49	+0.7
5,482,199	+		Pf6N2E2_4746	0.49	+0.4
5,482,199	+		Pf6N2E2_4746	0.49	-0.6
5,482,199	+		Pf6N2E2_4746	0.49	+0.7
5,482,200	-		Pf6N2E2_4746	0.49	+0.8
5,482,200	-		Pf6N2E2_4746	0.49	+0.1
5,482,200	-		Pf6N2E2_4746	0.49	-0.0
5,482,255	+		Pf6N2E2_4746	0.52	-0.1
5,482,267	+		Pf6N2E2_4746	0.52	+0.7
5,482,267	+		Pf6N2E2_4746	0.52	+1.0
5,482,267	+		Pf6N2E2_4746	0.52	-0.0
5,482,267	+		Pf6N2E2_4746	0.52	+1.7
5,482,267	+		Pf6N2E2_4746	0.52	+0.0
5,482,267	+		Pf6N2E2_4746	0.52	+0.4
5,482,268	-		Pf6N2E2_4746	0.52	-0.2
5,482,270	+		Pf6N2E2_4746	0.52	-0.5
5,482,270	+		Pf6N2E2_4746	0.52	+0.3
5,482,270	+		Pf6N2E2_4746	0.52	+0.5
5,482,271	-		Pf6N2E2_4746	0.52	-0.6
5,482,274	+		Pf6N2E2_4746	0.52	+0.1
5,482,274	+		Pf6N2E2_4746	0.52	+0.8
5,482,275	-		Pf6N2E2_4746	0.53	+0.2
5,482,283	-		Pf6N2E2_4746	0.53	+0.2
5,482,283	-		Pf6N2E2_4746	0.53	+0.0
5,482,402	+		Pf6N2E2_4746	0.58	+0.4
5,482,402	+		Pf6N2E2_4746	0.58	+0.1
5,482,468	+		Pf6N2E2_4746	0.60	-2.3
5,482,468	+		Pf6N2E2_4746	0.60	+2.2
5,482,468	+		Pf6N2E2_4746	0.60	+0.3
5,482,512	+		Pf6N2E2_4746	0.62	-1.1
5,482,512	+		Pf6N2E2_4746	0.62	-0.3
5,482,512	+		Pf6N2E2_4746	0.62	+0.1
5,482,512	+		Pf6N2E2_4746	0.62	-0.2
5,482,512	+		Pf6N2E2_4746	0.62	-0.6
5,482,512	+		Pf6N2E2_4746	0.62	-0.7
5,482,513	-		Pf6N2E2_4746	0.62	-0.9
5,482,594	+		Pf6N2E2_4746	0.66	-0.2
5,482,595	-		Pf6N2E2_4746	0.66	-0.3
5,482,595	-		Pf6N2E2_4746	0.66	-0.3
5,482,688	-		Pf6N2E2_4746	0.70	-0.3
5,482,759	+		Pf6N2E2_4746	0.72	-1.4
5,482,759	+		Pf6N2E2_4746	0.72	+0.7
5,482,759	+		Pf6N2E2_4746	0.72	-0.7
5,482,759	+		Pf6N2E2_4746	0.72	+0.5
5,482,759	+		Pf6N2E2_4746	0.72	+0.7
5,482,759	+		Pf6N2E2_4746	0.72	+1.4
5,482,759	+		Pf6N2E2_4746	0.72	-0.9
5,482,759	+		Pf6N2E2_4746	0.72	+0.2
5,482,759	+		Pf6N2E2_4746	0.72	+1.2
5,482,759	+		Pf6N2E2_4746	0.72	+0.3
5,482,760	-		Pf6N2E2_4746	0.73	+0.8
5,482,760	-		Pf6N2E2_4746	0.73	+0.4
5,482,760	-		Pf6N2E2_4746	0.73	+0.1
5,482,760	-		Pf6N2E2_4746	0.73	+1.4
5,482,760	-		Pf6N2E2_4746	0.73	-1.2
5,482,760	-		Pf6N2E2_4746	0.73	+0.4
5,482,760	-		Pf6N2E2_4746	0.73	-0.5
5,482,760	-		Pf6N2E2_4746	0.73	+0.7
5,482,760	-		Pf6N2E2_4746	0.73	-0.1
5,482,876	+		Pf6N2E2_4746	0.77	+0.1
5,482,877	-		Pf6N2E2_4746	0.77	-0.3
5,483,009	-		Pf6N2E2_4746	0.83	-0.2
5,483,009	-		Pf6N2E2_4746	0.83	-0.2
5,483,107	+		Pf6N2E2_4746	0.87	+0.7
5,483,107	+		Pf6N2E2_4746	0.87	+0.2
5,483,108	-		Pf6N2E2_4746	0.87	+0.1
5,483,108	-		Pf6N2E2_4746	0.87	+1.4
5,483,108	-		Pf6N2E2_4746	0.87	+0.0
5,483,108	-		Pf6N2E2_4746	0.87	-0.6
5,483,108	-		Pf6N2E2_4746	0.87	-1.1
5,483,108	-		Pf6N2E2_4746	0.87	-0.6
5,483,108	-		Pf6N2E2_4746	0.87	+0.4
5,483,305	+				+0.8
5,483,305	+				+0.2
5,483,305	+				+1.2
5,483,305	+				+0.3
5,483,305	+				+0.1
5,483,305	+				-0.7
5,483,306	-				+0.1
5,483,306	-				-1.2
5,483,306	-				+1.7
5,483,306	-				-0.7
5,483,306	-				-0.6
5,483,412	+				+0.0
5,483,426	+				-1.2
5,483,426	+				+0.1
5,483,426	+				-0.6
5,483,426	+				-1.1
5,483,427	-				-1.2
5,483,540	+				+0.1
5,483,540	+				+0.6
5,483,540	+				+0.8
5,483,541	-				+0.7
5,484,250	+		Pf6N2E2_4747	0.66	+0.0
5,484,250	+		Pf6N2E2_4747	0.66	-1.8
5,484,250	+		Pf6N2E2_4747	0.66	-0.8
5,484,266	-		Pf6N2E2_4747	0.68	-0.9