Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4143 and Pf1N1B4_4144 are separated by 224 nucleotides
Pf1N1B4_4143 - hypothetical protein, at 4,588,701 to 4,589,003
_4143
Pf1N1B4_4144 - Mobile element protein, at 4,589,228 to 4,589,341
_4144
Position (kb)
4589
4590 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4588.295 kb on + strand at 4588.296 kb on - strand at 4588.424 kb on + strand at 4588.424 kb on + strand at 4588.425 kb on - strand at 4588.425 kb on - strand at 4588.437 kb on - strand at 4588.464 kb on - strand at 4588.528 kb on + strand at 4588.632 kb on - strand at 4588.675 kb on - strand at 4588.675 kb on - strand at 4588.809 kb on - strand, within Pf1N1B4_4143 at 4588.865 kb on + strand, within Pf1N1B4_4143 at 4588.865 kb on + strand, within Pf1N1B4_4143 at 4588.866 kb on - strand, within Pf1N1B4_4143 at 4588.866 kb on - strand, within Pf1N1B4_4143 at 4588.866 kb on - strand at 4588.926 kb on + strand, within Pf1N1B4_4143 at 4588.979 kb on - strand at 4589.053 kb on + strand at 4589.054 kb on - strand at 4589.054 kb on - strand at 4589.058 kb on - strand at 4589.058 kb on - strand at 4589.058 kb on - strand at 4589.058 kb on - strand at 4589.058 kb on - strand at 4589.069 kb on - strand at 4589.168 kb on + strand at 4589.168 kb on + strand at 4589.169 kb on - strand at 4589.198 kb on + strand at 4589.199 kb on - strand at 4589.248 kb on + strand, within Pf1N1B4_4144 at 4589.339 kb on + strand at 4589.433 kb on + strand at 4589.433 kb on + strand at 4589.433 kb on + strand at 4589.434 kb on - strand at 4589.528 kb on + strand at 4589.566 kb on + strand at 4589.567 kb on - strand at 4589.678 kb on - strand at 4589.721 kb on + strand at 4589.839 kb on - strand at 4589.870 kb on - strand at 4589.896 kb on + strand at 4589.896 kb on + strand at 4589.897 kb on - strand at 4589.897 kb on - strand at 4589.897 kb on - strand at 4589.900 kb on - strand at 4590.095 kb on + strand at 4590.096 kb on - strand at 4590.096 kb on - strand at 4590.138 kb on - strand at 4590.140 kb on - strand at 4590.230 kb on - strand at 4590.268 kb on + strand at 4590.340 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 4,588,295 + +0.6 4,588,296 - +0.4 4,588,424 + -1.4 4,588,424 + +0.7 4,588,425 - -2.0 4,588,425 - -1.6 4,588,437 - -0.2 4,588,464 - +1.4 4,588,528 + -1.4 4,588,632 - -1.2 4,588,675 - -0.2 4,588,675 - -2.2 4,588,809 - Pf1N1B4_4143 0.36 -1.1 4,588,865 + Pf1N1B4_4143 0.54 +0.7 4,588,865 + Pf1N1B4_4143 0.54 +0.6 4,588,866 - Pf1N1B4_4143 0.54 -0.4 4,588,866 - Pf1N1B4_4143 0.54 -0.2 4,588,866 - +2.2 4,588,926 + Pf1N1B4_4143 0.74 +1.6 4,588,979 - -0.4 4,589,053 + -0.4 4,589,054 - +0.2 4,589,054 - +2.8 4,589,058 - -1.2 4,589,058 - +0.3 4,589,058 - +0.2 4,589,058 - -2.0 4,589,058 - +0.4 4,589,069 - -1.2 4,589,168 + -0.8 4,589,168 + +1.6 4,589,169 - -1.6 4,589,198 + +0.9 4,589,199 - +0.2 4,589,248 + Pf1N1B4_4144 0.18 -1.6 4,589,339 + -1.8 4,589,433 + +0.8 4,589,433 + -0.5 4,589,433 + -1.6 4,589,434 - -0.4 4,589,528 + -0.4 4,589,566 + -2.1 4,589,567 - -0.4 4,589,678 - -0.8 4,589,721 + -1.2 4,589,839 - +0.6 4,589,870 - +0.5 4,589,896 + -1.0 4,589,896 + +2.8 4,589,897 - -1.1 4,589,897 - +1.2 4,589,897 - +0.7 4,589,900 - -0.6 4,590,095 + +0.2 4,590,096 - +0.2 4,590,096 - +0.4 4,590,138 - -0.2 4,590,140 - -0.1 4,590,230 - -0.7 4,590,268 + -0.2 4,590,340 - -0.1
Or see this region's nucleotide sequence