Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03738

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
3,906,529	-				+1.9
3,906,529	-				+1.7
3,906,529	-				+1.5
3,906,545	+				-0.6
3,906,582	-				+0.8
3,906,582	-				-0.2
3,906,978	+		CCNA_03737	0.13	+1.1
3,907,165	+		CCNA_03737	0.76	+0.7
3,907,165	+		CCNA_03737	0.76	-0.6
3,907,165	+		CCNA_03737	0.76	-0.3
3,907,188	+		CCNA_03737	0.84	+1.4
3,907,188	+		CCNA_03737	0.84	+0.3
3,907,195	-		CCNA_03737	0.87	-1.1
3,907,370	+				+0.4
3,907,384	+				-0.2
3,907,384	+				+1.1
3,907,384	-				-1.6
3,907,384	-				-2.2
3,907,392	-				+0.3
3,907,392	-				-0.8
3,907,392	-				-3.2
3,907,408	+				-0.7
3,907,408	+				-0.4
3,907,408	+				-2.5
3,907,408	+				-0.9
3,907,416	-				-0.3
3,907,492	-				-2.9
3,907,530	+				+1.4
3,907,530	+				-1.6
3,907,538	-				+0.7
3,907,543	+				+0.2
3,907,558	+				-0.2
3,907,565	+				-3.0
3,907,568	-				-1.2
3,907,578	-				-0.3
3,907,585	-				-0.8
3,907,585	-				-1.6
3,907,585	-				-0.3
3,907,585	-				-1.5
3,907,604	+		CCNA_03738	0.11	-2.2
3,907,640	+		CCNA_03738	0.13	-1.0
3,907,645	+		CCNA_03738	0.13	-1.6
3,907,648	-		CCNA_03738	0.13	-2.6
3,907,653	-		CCNA_03738	0.14	-2.0
3,907,685	-		CCNA_03738	0.15	-1.6
3,907,773	-		CCNA_03738	0.20	-1.9
3,907,773	-		CCNA_03738	0.20	+1.6
3,907,783	-		CCNA_03738	0.21	-0.4
3,907,905	+		CCNA_03738	0.28	-0.2
3,907,910	+		CCNA_03738	0.28	+0.0
3,907,910	+		CCNA_03738	0.28	-0.1
3,907,913	-		CCNA_03738	0.28	-0.1
3,907,913	-				+1.4
3,907,913	-		CCNA_03738	0.28	-1.8
3,907,925	-		CCNA_03738	0.29	-0.8
3,907,935	+				+1.4
3,908,017	-		CCNA_03738	0.34	-1.9
3,908,091	-		CCNA_03738	0.38	-1.0
3,908,107	+		CCNA_03738	0.39	+1.4
3,908,130	+		CCNA_03738	0.40	-1.6
3,908,135	+		CCNA_03738	0.41	-0.1
3,908,156	-		CCNA_03738	0.42	-0.2
3,908,166	-		CCNA_03738	0.42	+0.3
3,908,166	-		CCNA_03738	0.42	-1.0
3,908,223	+		CCNA_03738	0.45	-0.6
3,908,240	+		CCNA_03738	0.46	+0.7
3,908,276	+		CCNA_03738	0.48	+1.7
3,908,294	-		CCNA_03738	0.49	-0.1
3,908,311	+		CCNA_03738	0.50	-0.8
3,908,340	+		CCNA_03738	0.52	-0.3
3,908,340	+		CCNA_03738	0.52	-0.2
3,908,349	-		CCNA_03738	0.53	-2.6
3,908,389	-		CCNA_03738	0.55	-0.9
3,908,406	-		CCNA_03738	0.56	+1.1
3,908,456	+		CCNA_03738	0.59	-0.1
3,908,475	+		CCNA_03738	0.60	+0.6
3,908,535	+		CCNA_03738	0.63	-1.1
3,908,544	-		CCNA_03738	0.63	-0.6
3,908,607	+		CCNA_03738	0.67	+0.0
3,908,626	+		CCNA_03738	0.68	-0.5
3,908,692	+		CCNA_03738	0.72	+0.4
3,908,729	+		CCNA_03738	0.74	-0.4
3,908,737	-		CCNA_03738	0.74	-0.5
3,908,857	-		CCNA_03738	0.81	+0.4
3,908,878	-		CCNA_03738	0.82	-0.2
3,908,925	+		CCNA_03738	0.85	-2.2
3,908,933	-		CCNA_03738	0.85	+1.0
3,908,933	-		CCNA_03738	0.85	-1.0
3,908,952	+		CCNA_03738	0.86	-2.0
3,908,959	+		CCNA_03738	0.87	+1.4
3,909,046	+				-2.9
3,909,047	+				-0.4
3,909,105	-				-2.1
3,909,111	+				+0.9
3,909,116	+				-1.6
3,909,116	+				-1.0
3,909,116	-				-1.6
3,909,146	+				-2.4
3,909,172	-				-0.8
3,909,180	+				-2.2
3,909,192	+				-1.5
3,909,200	-		CCNA_03739	0.15	+1.7
3,909,214	-		CCNA_03739	0.18	-0.0
3,909,214	-		CCNA_03739	0.18	+1.0
3,909,230	-		CCNA_03739	0.22	+0.5
3,909,277	-		CCNA_03739	0.32	+0.8
3,909,279	+		CCNA_03739	0.32	-0.0
3,909,292	-		CCNA_03739	0.35	+0.4
3,909,303	+		CCNA_03739	0.38	+0.2
3,909,315	+		CCNA_03739	0.40	+1.4
3,909,315	+		CCNA_03739	0.40	-0.1
3,909,323	-		CCNA_03739	0.42	+1.2
3,909,323	-		CCNA_03739	0.42	+0.3
3,909,323	-		CCNA_03739	0.42	+0.1
3,909,323	-		CCNA_03739	0.42	+0.0
3,909,323	-		CCNA_03739	0.42	+0.1
3,909,342	+		CCNA_03739	0.46	-1.9
3,909,371	+		CCNA_03739	0.53	+0.5
3,909,371	+		CCNA_03739	0.53	+1.2
3,909,371	+		CCNA_03739	0.53	+0.3
3,909,379	-		CCNA_03739	0.54	+1.2
3,909,410	-		CCNA_03739	0.61	+0.4
3,909,453	+		CCNA_03739	0.71	-1.4
3,909,453	+		CCNA_03739	0.71	-0.5
3,909,459	-		CCNA_03739	0.72	+0.4
3,909,474	-		CCNA_03739	0.75	+1.2
3,909,479	+		CCNA_03739	0.76	-1.1
3,909,511	+		CCNA_03739	0.83	-1.9
3,909,511	+		CCNA_03739	0.83	-0.3
3,909,511	+		CCNA_03739	0.83	-1.3
3,909,519	-		CCNA_03739	0.85	+1.8
3,909,519	-		CCNA_03739	0.85	+0.7
3,909,519	-		CCNA_03739	0.85	+0.2
3,909,519	-		CCNA_03739	0.85	+0.6
3,909,569	+				+0.0
3,909,569	+				+1.4
3,909,572	-				+1.1
3,909,602	+				-2.2
3,909,610	-				+1.1
3,909,610	-				+1.0
3,909,610	-				+1.4
3,909,610	-				+1.0
3,909,612	-				+1.6
3,909,624	+				-0.0
3,909,643	+				+1.3
3,909,672	+				-0.4
3,909,688	-				+1.6
3,909,724	-		CCNA_03740	0.12	+2.5
3,909,735	-		CCNA_03740	0.13	+1.7
3,909,759	-		CCNA_03740	0.16	+2.2
3,909,798	+		CCNA_03740	0.20	-2.0
3,909,798	+		CCNA_03740	0.20	-1.7
3,909,811	-		CCNA_03740	0.21	+2.4
3,909,904	+		CCNA_03740	0.30	-0.0
3,909,912	-		CCNA_03740	0.31	+2.7
3,909,927	+		CCNA_03740	0.33	-1.3
3,909,956	-		CCNA_03740	0.36	+2.0
3,909,990	-		CCNA_03740	0.39	+1.8
3,910,005	+		CCNA_03740	0.41	-0.2
3,910,049	-		CCNA_03740	0.45	+2.3
3,910,059	-		CCNA_03740	0.46	+2.3
3,910,100	-		CCNA_03740	0.50	+1.8
3,910,146	-		CCNA_03740	0.55	+2.2
3,910,163	+		CCNA_03740	0.57	-1.0
3,910,163	+		CCNA_03740	0.57	+0.0
3,910,172	+		CCNA_03740	0.57	+0.1
3,910,189	+		CCNA_03740	0.59	-1.0