Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01488

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
1,593,817	+				-1.9
1,593,817	+				-1.3
1,593,825	-				-0.7
1,593,825	-				-0.1
1,593,856	+				+1.0
1,593,877	-				-0.1
1,593,884	-				-0.1
1,593,899	+				+0.7
1,593,945	+				-2.2
1,593,947	+				-0.1
1,593,953	-				+0.1
1,594,021	-		CCNA_01487	0.17	-0.9
1,594,054	+		CCNA_01487	0.21	-1.2
1,594,117	+		CCNA_01487	0.29	-0.1
1,594,121	+		CCNA_01487	0.30	+0.9
1,594,125	-		CCNA_01487	0.31	-0.9
1,594,137	-		CCNA_01487	0.32	-1.0
1,594,139	+		CCNA_01487	0.32	-0.6
1,594,148	-				+0.9
1,594,191	+		CCNA_01487	0.39	-1.3
1,594,191	-		CCNA_01487	0.39	+0.3
1,594,251	-		CCNA_01487	0.47	+1.1
1,594,253	+		CCNA_01487	0.48	-1.1
1,594,253	+		CCNA_01487	0.48	+1.4
1,594,262	+		CCNA_01487	0.49	-0.8
1,594,337	+		CCNA_01487	0.59	+0.3
1,594,419	+		CCNA_01487	0.70	-1.8
1,594,433	+		CCNA_01487	0.72	-3.5
1,594,433	+		CCNA_01487	0.72	-0.6
1,594,433	+		CCNA_01487	0.72	-2.7
1,594,433	+		CCNA_01487	0.72	-1.0
1,594,433	+		CCNA_01487	0.72	-1.9
1,594,434	+		CCNA_01487	0.72	-0.3
1,594,464	+		CCNA_01487	0.76	-1.8
1,594,467	-		CCNA_01487	0.76	+1.3
1,594,469	+		CCNA_01487	0.77	-0.9
1,594,472	-		CCNA_01487	0.77	-0.7
1,594,482	-		CCNA_01487	0.78	+0.2
1,594,504	+		CCNA_01487	0.81	+0.2
1,594,569	+				-1.3
1,594,603	+				-0.1
1,594,607	+				-0.1
1,594,646	-				+0.4
1,594,646	-				-1.2
1,594,666	+				-2.1
1,594,686	+				-1.8
1,594,701	-				-1.8
1,594,701	-				+1.9
1,594,739	+				+1.3
1,594,739	+				-0.4
1,594,799	+				-1.5
1,594,799	+				-0.4
1,594,799	+				-3.0
1,594,799	+				+1.9
1,594,807	+				+0.3
1,594,807	-				-1.0
1,594,820	+				+0.5
1,594,820	+				-1.8
1,594,828	-				-0.7
1,594,828	-				+0.9
1,594,828	-				-1.1
1,594,881	+				+0.1
1,594,916	+				-0.6
1,594,924	-				-1.8
1,594,924	-				-1.9
1,594,928	+				+0.6
1,594,928	+				-1.2
1,594,928	+				+1.6
1,594,928	+				-0.1
1,594,936	-				-1.6
1,594,969	+				+0.8
1,594,974	+				+2.3
1,594,987	-				-1.1
1,595,009	+		CCNA_01488	0.11	+0.5
1,595,017	-		CCNA_01488	0.11	-2.0
1,595,062	+		CCNA_01488	0.14	-1.7
1,595,071	-		CCNA_01488	0.14	-2.3
1,595,094	-		CCNA_01488	0.16	+0.4
1,595,141	-		CCNA_01488	0.18	-0.2
1,595,157	+		CCNA_01488	0.19	+0.9
1,595,157	+		CCNA_01488	0.19	+2.4
1,595,178	-		CCNA_01488	0.20	-2.0
1,595,185	+		CCNA_01488	0.21	+2.0
1,595,193	-		CCNA_01488	0.21	-0.3
1,595,273	+		CCNA_01488	0.26	+1.6
1,595,273	+		CCNA_01488	0.26	+1.7
1,595,273	+		CCNA_01488	0.26	-0.2
1,595,273	+		CCNA_01488	0.26	+1.9
1,595,273	+		CCNA_01488	0.26	-1.4
1,595,281	-		CCNA_01488	0.26	-1.3
1,595,292	+		CCNA_01488	0.27	+0.4
1,595,325	+		CCNA_01488	0.28	+0.9
1,595,327	+		CCNA_01488	0.29	+1.2
1,595,327	+		CCNA_01488	0.29	+1.4
1,595,333	-		CCNA_01488	0.29	-2.0
1,595,333	-		CCNA_01488	0.29	-3.1
1,595,333	-		CCNA_01488	0.29	-0.4
1,595,343	-		CCNA_01488	0.29	-2.2
1,595,396	+		CCNA_01488	0.32	+2.0
1,595,404	-		CCNA_01488	0.33	-1.2
1,595,418	+		CCNA_01488	0.34	+1.5
1,595,430	+		CCNA_01488	0.34	+1.3
1,595,479	-		CCNA_01488	0.37	-0.7
1,595,563	-		CCNA_01488	0.42	-0.8
1,595,573	-		CCNA_01488	0.42	+0.7
1,595,573	-		CCNA_01488	0.42	+2.4
1,595,574	+		CCNA_01488	0.42	+0.4
1,595,582	-		CCNA_01488	0.43	-0.6
1,595,590	+		CCNA_01488	0.43	+1.5
1,595,598	-		CCNA_01488	0.44	+0.5
1,595,633	-		CCNA_01488	0.45	-1.0
1,595,715	-		CCNA_01488	0.50	-2.2
1,595,785	+		CCNA_01488	0.54	-1.8
1,595,791	-		CCNA_01488	0.54	-1.4
1,595,839	+		CCNA_01488	0.57	-0.1
1,595,858	+		CCNA_01488	0.58	+0.1
1,595,877	+		CCNA_01488	0.59	+0.4
1,595,877	+		CCNA_01488	0.59	+0.5
1,595,877	+		CCNA_01488	0.59	+1.3
1,595,892	+		CCNA_01488	0.60	+0.4
1,595,892	+		CCNA_01488	0.60	-1.7
1,595,979	+		CCNA_01488	0.65	+1.5
1,595,986	+		CCNA_01488	0.65	-0.6
1,595,988	+		CCNA_01488	0.65	-0.5
1,595,994	-		CCNA_01488	0.66	-2.1
1,595,994	-		CCNA_01488	0.66	+1.7
1,595,994	-		CCNA_01488	0.66	-2.2
1,596,001	+		CCNA_01488	0.66	+0.9
1,596,013	+		CCNA_01488	0.67	+0.5
1,596,016	-		CCNA_01488	0.67	-0.7
1,596,031	-		CCNA_01488	0.68	-1.7
1,596,109	-		CCNA_01488	0.72	-2.0
1,596,113	+		CCNA_01488	0.72	+0.4
1,596,121	-		CCNA_01488	0.73	-0.7
1,596,121	-		CCNA_01488	0.73	-1.0
1,596,181	+		CCNA_01488	0.76	+0.7
1,596,194	+		CCNA_01488	0.77	+1.5
1,596,194	+		CCNA_01488	0.77	+0.2
1,596,296	+		CCNA_01488	0.82	-0.3
1,596,304	-		CCNA_01488	0.83	-2.7
1,596,307	+		CCNA_01488	0.83	+0.4
1,596,307	+		CCNA_01488	0.83	+0.5
1,596,315	+		CCNA_01488	0.83	-2.6
1,596,334	-		CCNA_01488	0.84	+0.1
1,596,350	+		CCNA_01488	0.85	-0.1
1,596,360	+		CCNA_01488	0.86	+0.9
1,596,360	+		CCNA_01488	0.86	-0.9
1,596,360	+		CCNA_01488	0.86	-1.8
1,596,368	-		CCNA_01488	0.86	-1.3
1,596,368	-		CCNA_01488	0.86	-0.4
1,596,368	-		CCNA_01488	0.86	-0.3
1,596,391	-		CCNA_01488	0.88	+1.6
1,596,391	-		CCNA_01488	0.88	+0.3
1,596,391	-		CCNA_01488	0.88	+1.4
1,596,556	-				-0.1
1,596,580	+				-0.2
1,596,585	+				+0.1
1,596,585	+				-0.3
1,596,585	+				-1.8
1,596,585	+				-0.5
1,596,585	+				+0.4
1,596,585	+				-0.8
1,596,585	+				+0.7
1,596,593	-				-2.0
1,596,593	-				-0.9
1,596,684	+				-0.7
1,596,692	-				-1.4
1,596,692	-				-0.4
1,596,700	-				+0.9
1,596,705	-				-0.0
1,596,791	+				-0.9
1,596,860	+				-0.4
1,596,900	+		CCNA_01489	0.11	-1.8
1,596,981	+		CCNA_01489	0.16	+0.8
1,596,984	-		CCNA_01489	0.17	-2.6
1,596,984	-		CCNA_01489	0.17	-0.9
1,596,994	-		CCNA_01489	0.17	-0.8
1,597,019	+		CCNA_01489	0.19	-0.7
1,597,027	+		CCNA_01489	0.19	-0.6
1,597,041	+		CCNA_01489	0.20	+0.3
1,597,049	-		CCNA_01489	0.21	+0.1
1,597,049	-		CCNA_01489	0.21	-2.0
1,597,097	+		CCNA_01489	0.24	-0.4
1,597,105	-		CCNA_01489	0.24	+1.6
1,597,127	-		CCNA_01489	0.26	-1.0
1,597,147	+		CCNA_01489	0.27	-0.6
1,597,209	+		CCNA_01489	0.31	-1.2
1,597,220	+		CCNA_01489	0.32	-0.1
1,597,225	-		CCNA_01489	0.32	+0.5
1,597,251	-		CCNA_01489	0.34	-0.6
1,597,357	-		CCNA_01489	0.41	-1.0
1,597,359	-		CCNA_01489	0.41	-1.0
1,597,361	+		CCNA_01489	0.41	-1.8
1,597,458	-		CCNA_01489	0.47	+0.3
1,597,463	-		CCNA_01489	0.47	-2.9
1,597,476	-		CCNA_01489	0.48	-1.0
1,597,510	+		CCNA_01489	0.50	+0.3
1,597,510	+		CCNA_01489	0.50	-3.5
1,597,510	+		CCNA_01489	0.50	-2.6
1,597,510	+		CCNA_01489	0.50	-3.0
1,597,510	+		CCNA_01489	0.50	-1.6
1,597,518	-		CCNA_01489	0.51	-2.0
1,597,555	-		CCNA_01489	0.53	+1.2
1,597,582	-		CCNA_01489	0.55	+0.6
1,597,593	-		CCNA_01489	0.56	-1.4