Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01113

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
1,217,156	+		CCNA_01111	0.35	-1.4
1,217,200	+		CCNA_01111	0.47	-0.8
1,217,219	-		CCNA_01111	0.52	-0.5
1,217,220	+		CCNA_01111	0.52	+0.4
1,217,220	+		CCNA_01111	0.52	-2.6
1,217,220	+		CCNA_01111	0.52	-2.5
1,217,223	-		CCNA_01111	0.53	-1.1
1,217,223	-		CCNA_01111	0.53	+1.2
1,217,225	+		CCNA_01111	0.53	-0.7
1,217,225	+		CCNA_01111	0.53	+1.5
1,217,228	-		CCNA_01111	0.54	-1.2
1,217,322	+		CCNA_01111	0.80	-0.4
1,217,323	+		CCNA_01111	0.80	+1.1
1,217,346	+		CCNA_01111	0.86	+0.3
1,217,346	+		CCNA_01111	0.86	-0.5
1,217,354	-		CCNA_01111	0.88	-0.6
1,217,360	+				+1.5
1,217,437	-				-1.4
1,217,473	+		CCNA_01112	0.10	+3.3
1,217,486	-		CCNA_01112	0.12	+0.2
1,217,499	-		CCNA_01112	0.14	+1.5
1,217,523	+		CCNA_01112	0.17	-1.2
1,217,567	-		CCNA_01112	0.23	-0.5
1,217,582	+		CCNA_01112	0.25	+0.4
1,217,582	+		CCNA_01112	0.25	+1.6
1,217,582	+		CCNA_01112	0.25	+0.4
1,217,590	-		CCNA_01112	0.26	+2.2
1,217,590	-		CCNA_01112	0.26	-0.5
1,217,608	-				-0.0
1,217,609	-		CCNA_01112	0.29	-0.5
1,217,609	-		CCNA_01112	0.29	+0.9
1,217,783	-		CCNA_01112	0.53	-0.7
1,217,793	-		CCNA_01112	0.54	+0.8
1,217,793	-		CCNA_01112	0.54	-0.8
1,217,798	-		CCNA_01112	0.55	+0.2
1,217,842	-		CCNA_01112	0.61	+0.7
1,217,915	-		CCNA_01112	0.71	+1.2
1,217,945	+		CCNA_01112	0.75	+0.1
1,217,953	-		CCNA_01112	0.76	-0.0
1,217,979	+		CCNA_01112	0.79	-0.5
1,217,979	+		CCNA_01112	0.79	-1.8
1,217,979	+		CCNA_01112	0.79	-1.1
1,217,987	-		CCNA_01112	0.80	-0.1
1,217,987	-		CCNA_01112	0.80	+0.5
1,217,997	-		CCNA_01112	0.82	-0.7
1,218,015	-		CCNA_01112	0.84	+0.1
1,218,186	+				+0.9
1,218,196	+				-0.2
1,218,204	-				+0.7
1,218,216	-				+0.7
1,218,224	-				+2.0
1,218,242	+		CCNA_01113	0.11	+0.8
1,218,252	+		CCNA_01113	0.12	-0.0
1,218,252	+		CCNA_01113	0.12	-0.3
1,218,260	-		CCNA_01113	0.13	+0.9
1,218,260	-		CCNA_01113	0.13	+1.2
1,218,260	-		CCNA_01113	0.13	+0.8
1,218,260	-		CCNA_01113	0.13	+1.1
1,218,260	-		CCNA_01113	0.13	+0.9
1,218,260	-		CCNA_01113	0.13	+1.4
1,218,260	-		CCNA_01113	0.13	+1.8
1,218,260	-		CCNA_01113	0.13	+1.6
1,218,260	-		CCNA_01113	0.13	+1.3
1,218,260	-		CCNA_01113	0.13	-1.1
1,218,260	-		CCNA_01113	0.13	+0.8
1,218,279	+		CCNA_01113	0.15	-1.7
1,218,279	-		CCNA_01113	0.15	+1.4
1,218,284	+				+1.2
1,218,292	-		CCNA_01113	0.16	+1.3
1,218,299	+		CCNA_01113	0.17	-0.7
1,218,306	-		CCNA_01113	0.18	+0.6
1,218,306	-		CCNA_01113	0.18	+0.5
1,218,340	-		CCNA_01113	0.21	+1.5
1,218,342	+		CCNA_01113	0.21	-1.6
1,218,353	+		CCNA_01113	0.23	-0.3
1,218,353	+		CCNA_01113	0.23	-0.5
1,218,353	+		CCNA_01113	0.23	-0.5
1,218,353	+		CCNA_01113	0.23	-0.7
1,218,353	+		CCNA_01113	0.23	-2.3
1,218,353	+		CCNA_01113	0.23	-1.5
1,218,353	+		CCNA_01113	0.23	+3.5
1,218,353	+		CCNA_01113	0.23	+2.2
1,218,361	-		CCNA_01113	0.23	+1.1
1,218,361	-		CCNA_01113	0.23	+1.3
1,218,361	-		CCNA_01113	0.23	+1.5
1,218,361	-		CCNA_01113	0.23	-1.2
1,218,361	-		CCNA_01113	0.23	+0.5
1,218,361	-		CCNA_01113	0.23	+1.5
1,218,363	+		CCNA_01113	0.24	+2.6
1,218,363	+		CCNA_01113	0.24	+1.9
1,218,363	+		CCNA_01113	0.24	+3.2
1,218,363	+		CCNA_01113	0.24	+2.7
1,218,363	+		CCNA_01113	0.24	+2.7
1,218,363	+		CCNA_01113	0.24	+3.0
1,218,363	+		CCNA_01113	0.24	+2.6
1,218,363	+		CCNA_01113	0.24	+2.8
1,218,363	+		CCNA_01113	0.24	+2.0
1,218,363	+		CCNA_01113	0.24	+2.9
1,218,371	-		CCNA_01113	0.24	-1.5
1,218,371	-		CCNA_01113	0.24	-0.6
1,218,371	-		CCNA_01113	0.24	+1.5
1,218,395	-		CCNA_01113	0.27	+0.5
1,218,415	-		CCNA_01113	0.29	+1.6
1,218,419	+		CCNA_01113	0.30	-2.0
1,218,427	-		CCNA_01113	0.30	+1.0
1,218,427	-		CCNA_01113	0.30	-0.4
1,218,438	+		CCNA_01113	0.32	-2.3
1,218,438	+		CCNA_01113	0.32	-0.5
1,218,438	+		CCNA_01113	0.32	-1.2
1,218,443	+		CCNA_01113	0.32	+0.1
1,218,446	-		CCNA_01113	0.32	+2.6
1,218,446	-		CCNA_01113	0.32	+2.6
1,218,446	-		CCNA_01113	0.32	+1.8
1,218,448	+		CCNA_01113	0.33	-1.9
1,218,448	+		CCNA_01113	0.33	-1.4
1,218,448	+		CCNA_01113	0.33	+0.4
1,218,448	+		CCNA_01113	0.33	+2.8
1,218,448	+		CCNA_01113	0.33	+0.5
1,218,456	-		CCNA_01113	0.33	+0.7
1,218,456	-		CCNA_01113	0.33	+1.8
1,218,456	-		CCNA_01113	0.33	+0.3
1,218,456	-		CCNA_01113	0.33	-0.5
1,218,456	-		CCNA_01113	0.33	+1.8
1,218,456	-		CCNA_01113	0.33	+1.2
1,218,456	-		CCNA_01113	0.33	+1.9
1,218,456	-		CCNA_01113	0.33	-0.7
1,218,456	-		CCNA_01113	0.33	+0.8
1,218,488	+		CCNA_01113	0.37	-0.5
1,218,488	-		CCNA_01113	0.37	-0.4
1,218,494	+		CCNA_01113	0.37	+0.5
1,218,502	-		CCNA_01113	0.38	-0.0
1,218,502	-		CCNA_01113	0.38	-0.3
1,218,502	-		CCNA_01113	0.38	+0.4
1,218,502	-		CCNA_01113	0.38	+1.7
1,218,541	+		CCNA_01113	0.42	+0.5
1,218,544	-		CCNA_01113	0.43	+0.1
1,218,572	-		CCNA_01113	0.46	-1.5
1,218,574	-		CCNA_01113	0.46	+0.6
1,218,582	-		CCNA_01113	0.47	+1.3
1,218,664	-		CCNA_01113	0.55	+1.8
1,218,672	-		CCNA_01113	0.56	+0.9
1,218,724	+		CCNA_01113	0.62	-1.2
1,218,732	-		CCNA_01113	0.63	+1.0
1,218,732	-		CCNA_01113	0.63	+1.1
1,218,732	-		CCNA_01113	0.63	+2.0
1,218,760	-		CCNA_01113	0.66	+0.6
1,218,765	-				+0.8
1,218,789	+		CCNA_01113	0.69	+0.7
1,218,789	+		CCNA_01113	0.69	+2.2
1,218,797	-		CCNA_01113	0.69	-1.0
1,218,803	-		CCNA_01113	0.70	+0.5
1,218,849	+		CCNA_01113	0.75	-0.7
1,218,851	+		CCNA_01113	0.75	-1.2
1,218,868	-		CCNA_01113	0.77	-0.1
1,218,876	-		CCNA_01113	0.78	+0.8
1,218,904	+		CCNA_01113	0.81	-1.6
1,218,904	+		CCNA_01113	0.81	-1.2
1,218,912	-		CCNA_01113	0.82	+0.4
1,219,008	-				+1.6
1,219,008	-				+0.8
1,219,026	-				-2.4
1,219,037	+				+0.6
1,219,052	+				-1.4
1,219,052	+				-0.5
1,219,060	-				+2.0
1,219,499	+				-0.4
1,219,518	-				-0.0
1,219,535	+				-0.4
1,219,543	-				+0.7
1,219,543	-				-0.9
1,219,554	+				-0.5
1,219,562	-				-0.2
1,219,596	+				+0.7
1,219,599	-				-0.7
1,219,601	-				+0.4
1,219,602	+				-0.4
1,219,610	-				-1.0
1,219,659	-		CCNA_01115	0.14	-0.3
1,219,692	-		CCNA_01115	0.18	-1.3
1,219,694	+		CCNA_01115	0.19	-2.3
1,219,715	-		CCNA_01115	0.21	-1.7
1,219,751	-		CCNA_01115	0.26	+1.8
1,219,751	-		CCNA_01115	0.26	+0.5
1,219,775	-		CCNA_01115	0.29	+0.3
1,219,812	-		CCNA_01115	0.33	+0.9
1,219,833	+		CCNA_01115	0.36	+0.2
1,219,834	-		CCNA_01115	0.36	-0.8
1,219,856	-		CCNA_01115	0.39	-1.6
1,219,861	-		CCNA_01115	0.40	+0.6
1,219,862	+		CCNA_01115	0.40	-1.0
1,219,862	+		CCNA_01115	0.40	-0.4
1,219,870	-		CCNA_01115	0.41	-1.2
1,219,870	-		CCNA_01115	0.41	-0.2
1,219,890	+		CCNA_01115	0.43	-1.0
1,219,890	+		CCNA_01115	0.43	-1.1
1,220,002	-		CCNA_01115	0.57	-2.3
1,220,033	-		CCNA_01115	0.61	-1.6
1,220,060	-		CCNA_01115	0.65	-0.9
1,220,061	+		CCNA_01115	0.65	+2.5
1,220,061	+		CCNA_01115	0.65	+2.7