Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16175

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,656,359	+		AO356_16170	0.46	-2.0
3,656,359	+		AO356_16170	0.46	-1.5
3,656,788	+		AO356_16170	0.71	-0.5
3,656,788	+		AO356_16170	0.71	-2.0
3,656,789	-		AO356_16170	0.71	-2.6
3,656,791	+		AO356_16170	0.71	-1.9
3,656,792	-		AO356_16170	0.71	-2.5
3,656,792	-		AO356_16170	0.71	-0.8
3,656,792	-		AO356_16170	0.71	+0.5
3,656,966	-		AO356_16170	0.81	-0.0
3,657,033	+		AO356_16170	0.85	-3.0
3,657,034	-		AO356_16170	0.85	-2.5
3,657,034	-		AO356_16170	0.85	-3.0
3,657,040	+		AO356_16170	0.85	-2.6
3,657,040	+		AO356_16170	0.85	-0.8
3,657,040	+		AO356_16170	0.85	-2.6
3,657,064	+		AO356_16170	0.87	-1.3
3,657,064	+		AO356_16170	0.87	-0.5
3,657,064	+		AO356_16170	0.87	-1.6
3,657,064	+		AO356_16170	0.87	-3.0
3,657,064	+		AO356_16170	0.87	-1.0
3,657,064	+		AO356_16170	0.87	-1.0
3,657,064	+		AO356_16170	0.87	-2.9
3,657,064	+		AO356_16170	0.87	+0.5
3,657,064	+		AO356_16170	0.87	-1.6
3,657,065	-		AO356_16170	0.87	-2.2
3,657,065	-		AO356_16170	0.87	-1.8
3,657,229	+				-2.5
3,657,264	+				-2.8
3,657,288	+				-1.3
3,657,288	+				-1.0
3,657,288	+				-1.3
3,657,288	+				-1.6
3,657,288	+				-2.0
3,657,288	+				-1.0
3,657,289	-				-1.8
3,657,289	-				-2.0
3,657,289	-				-2.2
3,657,289	-				-2.0
3,657,289	-				-0.8
3,657,292	+				-1.5
3,657,292	+				-1.2
3,657,293	-				-1.0
3,657,293	-				-1.6
3,657,308	+				-1.8
3,657,308	+				-3.2
3,657,308	+				-2.5
3,657,309	-				-1.6
3,657,309	-				-1.5
3,657,309	-				-0.8
3,657,309	-				-1.2
3,657,309	-				-2.8
3,657,355	+		AO356_16175	0.12	-3.0
3,657,355	+		AO356_16175	0.12	-1.9
3,657,355	+		AO356_16175	0.12	-2.6
3,657,355	+		AO356_16175	0.12	-3.2
3,657,355	+		AO356_16175	0.12	-3.1
3,657,356	-		AO356_16175	0.12	-3.0
3,657,356	-		AO356_16175	0.12	-1.9
3,657,356	-		AO356_16175	0.12	-1.6
3,657,378	+		AO356_16175	0.16	-0.8
3,657,378	+		AO356_16175	0.16	-0.6
3,657,378	+		AO356_16175	0.16	-2.2
3,657,378	+		AO356_16175	0.16	-1.8
3,657,378	+		AO356_16175	0.16	-2.6
3,657,378	+		AO356_16175	0.16	-1.3
3,657,379	-		AO356_16175	0.17	-0.3
3,657,379	-		AO356_16175	0.17	-0.8
3,657,379	-		AO356_16175	0.17	-2.2
3,657,379	-		AO356_16175	0.17	-0.5
3,657,443	+		AO356_16175	0.30	-2.9
3,657,605	+		AO356_16175	0.63	-3.7
3,657,605	+		AO356_16175	0.63	-4.4
3,657,605	+		AO356_16175	0.63	-1.5
3,657,606	-		AO356_16175	0.63	-2.7
3,657,608	+		AO356_16175	0.63	-2.6
3,657,615	-		AO356_16175	0.65	-0.5
3,657,618	+		AO356_16175	0.65	+0.5
3,657,618	+		AO356_16175	0.65	-1.2
3,657,619	-		AO356_16175	0.65	-0.8
3,657,619	-		AO356_16175	0.65	-1.5
3,657,619	-		AO356_16175	0.65	-2.3
3,657,654	+		AO356_16175	0.73	-2.5
3,657,654	+		AO356_16175	0.73	-3.2
3,657,654	+		AO356_16175	0.73	-1.6
3,657,655	-		AO356_16175	0.73	-1.5
3,657,655	-		AO356_16175	0.73	-1.6
3,657,655	-		AO356_16175	0.73	-0.0
3,657,657	-		AO356_16175	0.73	-1.3
3,657,657	-		AO356_16175	0.73	-3.0
3,657,737	-		AO356_16175	0.89	-2.8
3,657,775	+				-2.5
3,657,775	+				+0.4
3,657,775	+				-1.0
3,657,776	-				-2.4
3,657,776	-				-1.4
3,657,786	+				-0.7
3,657,787	-				-2.2
3,657,787	-				-1.0
3,657,787	-				-4.8
3,657,796	+				-1.4
3,657,796	+				-0.3
3,657,797	-				-3.3
3,657,821	-				-1.8
3,657,822	+				+0.8
3,657,822	+				+0.3
3,657,822	+				+0.8
3,657,822	+				-1.2
3,657,823	-				-1.0
3,657,823	-				-2.2
3,657,823	-				-2.6
3,657,851	+				-3.9
3,657,975	-		AO356_16180	0.14	-0.8
3,657,975	-		AO356_16180	0.14	-0.3
3,658,098	+		AO356_16180	0.26	-1.8
3,658,098	+		AO356_16180	0.26	-3.0
3,658,099	-		AO356_16180	0.26	-1.3
3,658,170	+		AO356_16180	0.33	-3.0
3,658,170	+		AO356_16180	0.33	-2.5
3,658,170	+		AO356_16180	0.33	-3.3
3,658,170	+		AO356_16180	0.33	-3.2
3,658,170	+		AO356_16180	0.33	-1.6
3,658,170	+		AO356_16180	0.33	-3.3
3,658,171	-		AO356_16180	0.33	-3.2
3,658,171	-		AO356_16180	0.33	-2.0
3,658,171	-		AO356_16180	0.33	-1.6
3,658,171	-		AO356_16180	0.33	-1.6
3,658,291	-		AO356_16180	0.45	-2.0
3,658,291	-		AO356_16180	0.45	-1.9
3,658,291	-		AO356_16180	0.45	-1.3
3,658,332	+		AO356_16180	0.49	-1.3
3,658,332	+		AO356_16180	0.49	-1.0
3,658,332	+		AO356_16180	0.49	-1.0
3,658,333	-		AO356_16180	0.49	-3.2
3,658,333	-		AO356_16180	0.49	-3.2
3,658,358	+		AO356_16180	0.52	-2.0
3,658,359	-		AO356_16180	0.52	-3.5
3,658,503	+		AO356_16180	0.66	-2.5
3,658,503	+		AO356_16180	0.66	-2.4
3,658,503	+		AO356_16180	0.66	-2.8
3,658,503	+		AO356_16180	0.66	-3.3
3,658,504	-		AO356_16180	0.66	-2.0
3,658,548	+		AO356_16180	0.70	-3.7
3,658,548	+		AO356_16180	0.70	-1.3
3,658,548	+		AO356_16180	0.70	-0.8
3,658,548	+		AO356_16180	0.70	-1.8
3,658,548	+		AO356_16180	0.70	-2.8
3,658,548	+		AO356_16180	0.70	-0.5
3,658,548	+		AO356_16180	0.70	-2.5
3,658,548	+		AO356_16180	0.70	-2.6
3,658,548	+		AO356_16180	0.70	-1.5
3,658,548	+		AO356_16180	0.70	-3.7
3,658,549	-		AO356_16180	0.70	-0.8
3,658,549	-		AO356_16180	0.70	-2.2
3,658,549	-		AO356_16180	0.70	-3.3
3,658,549	-		AO356_16180	0.70	-2.6
3,658,549	-		AO356_16180	0.70	-2.4
3,658,549	-		AO356_16180	0.70	-2.5
3,658,549	-		AO356_16180	0.70	-2.9
3,658,575	+		AO356_16180	0.73	-2.0
3,658,575	+		AO356_16180	0.73	-2.7
3,658,575	+		AO356_16180	0.73	-2.5
3,658,576	-		AO356_16180	0.73	-0.9
3,658,576	-		AO356_16180	0.73	-3.5
3,658,608	+		AO356_16180	0.76	-2.0
3,658,608	+		AO356_16180	0.76	-2.3
3,658,609	-		AO356_16180	0.76	-0.5
3,658,609	-		AO356_16180	0.76	-2.8
3,658,609	-		AO356_16180	0.76	-2.5
3,658,609	-		AO356_16180	0.76	-2.4
3,658,673	+		AO356_16180	0.82	-1.6
3,658,673	+		AO356_16180	0.82	-2.8
3,658,673	+		AO356_16180	0.82	-2.7
3,658,674	-		AO356_16180	0.83	-1.3
3,658,674	-		AO356_16180	0.83	-1.5
3,658,690	-		AO356_16180	0.84	-3.3
3,658,690	-		AO356_16180	0.84	-0.8
3,658,690	-		AO356_16180	0.84	-3.5
3,658,690	-		AO356_16180	0.84	-1.1