Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_13250

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,011,757	+		AO356_13245	0.29	-0.9
3,011,757	+		AO356_13245	0.29	-0.2
3,011,758	-		AO356_13245	0.29	+0.6
3,011,758	-		AO356_13245	0.29	-0.4
3,011,758	-		AO356_13245	0.29	-0.1
3,011,760	+		AO356_13245	0.30	-2.2
3,011,760	+		AO356_13245	0.30	+0.6
3,011,760	+		AO356_13245	0.30	+1.3
3,011,760	+		AO356_13245	0.30	-0.2
3,011,760	+		AO356_13245	0.30	-0.1
3,011,760	+		AO356_13245	0.30	+0.9
3,011,761	-		AO356_13245	0.30	+0.1
3,011,761	-		AO356_13245	0.30	+0.3
3,011,761	-		AO356_13245	0.30	-1.2
3,011,761	-		AO356_13245	0.30	+0.6
3,011,761	-		AO356_13245	0.30	-0.5
3,011,761	-		AO356_13245	0.30	+0.5
3,011,761	-		AO356_13245	0.30	-0.2
3,011,761	-		AO356_13245	0.30	-0.3
3,011,764	-		AO356_13245	0.30	-0.6
3,011,764	-		AO356_13245	0.30	+1.4
3,011,797	-		AO356_13245	0.33	+0.7
3,011,829	-		AO356_13245	0.36	+0.9
3,011,850	+		AO356_13245	0.38	+0.5
3,011,850	+		AO356_13245	0.38	-0.4
3,011,851	-		AO356_13245	0.38	+0.7
3,011,851	-		AO356_13245	0.38	-0.4
3,011,895	+		AO356_13245	0.42	+0.8
3,011,895	+		AO356_13245	0.42	-0.2
3,011,895	+		AO356_13245	0.42	-0.2
3,011,895	+		AO356_13245	0.42	+0.8
3,011,895	+		AO356_13245	0.42	+0.8
3,011,895	+		AO356_13245	0.42	-0.2
3,011,895	+		AO356_13245	0.42	+1.0
3,011,895	+		AO356_13245	0.42	+0.4
3,011,895	+		AO356_13245	0.42	+1.4
3,011,895	+		AO356_13245	0.42	-0.6
3,011,895	+		AO356_13245	0.42	-0.8
3,011,896	-		AO356_13245	0.42	-0.1
3,011,896	-		AO356_13245	0.42	-1.7
3,011,896	-		AO356_13245	0.42	+0.5
3,011,896	-		AO356_13245	0.42	+0.1
3,011,896	-		AO356_13245	0.42	+0.6
3,011,896	-		AO356_13245	0.42	+0.6
3,011,896	-		AO356_13245	0.42	-0.2
3,011,896	-		AO356_13245	0.42	+0.2
3,011,898	+		AO356_13245	0.43	+1.1
3,011,898	+		AO356_13245	0.43	-1.2
3,011,898	+		AO356_13245	0.43	-0.2
3,011,898	+		AO356_13245	0.43	+0.3
3,011,898	+		AO356_13245	0.43	+1.5
3,011,898	+		AO356_13245	0.43	-0.6
3,011,898	+		AO356_13245	0.43	+0.8
3,011,898	+		AO356_13245	0.43	+0.0
3,011,899	-		AO356_13245	0.43	+0.9
3,011,899	-		AO356_13245	0.43	+0.8
3,011,899	-		AO356_13245	0.43	+1.7
3,011,899	-		AO356_13245	0.43	-1.0
3,011,899	-		AO356_13245	0.43	+0.5
3,011,899	-		AO356_13245	0.43	+0.3
3,011,922	+		AO356_13245	0.45	-0.4
3,011,967	+		AO356_13245	0.49	+0.1
3,011,967	+		AO356_13245	0.49	-1.4
3,011,968	-		AO356_13245	0.49	-0.7
3,011,968	-		AO356_13245	0.49	-0.1
3,011,968	-		AO356_13245	0.49	+0.2
3,011,968	-		AO356_13245	0.49	-0.5
3,012,000	+		AO356_13245	0.52	-0.2
3,012,000	+		AO356_13245	0.52	-0.0
3,012,000	+		AO356_13245	0.52	-0.2
3,012,000	+		AO356_13245	0.52	+0.5
3,012,000	+		AO356_13245	0.52	+0.6
3,012,001	-		AO356_13245	0.52	+1.3
3,012,001	-		AO356_13245	0.52	-0.9
3,012,001	-		AO356_13245	0.52	+1.0
3,012,001	-		AO356_13245	0.52	-0.4
3,012,001	-		AO356_13245	0.52	-0.1
3,012,001	-		AO356_13245	0.52	-0.2
3,012,001	-		AO356_13245	0.52	+0.7
3,012,001	-		AO356_13245	0.52	+1.3
3,012,031	+		AO356_13245	0.55	+0.6
3,012,031	+		AO356_13245	0.55	-0.6
3,012,031	+		AO356_13245	0.55	-0.6
3,012,032	-		AO356_13245	0.55	+0.2
3,012,032	-		AO356_13245	0.55	-0.9
3,012,057	+		AO356_13245	0.58	-0.0
3,012,058	-		AO356_13245	0.58	+0.4
3,012,058	-		AO356_13245	0.58	+0.6
3,012,063	+		AO356_13245	0.58	-0.2
3,012,063	+		AO356_13245	0.58	-0.6
3,012,165	+		AO356_13245	0.68	+0.3
3,012,166	-		AO356_13245	0.68	-0.3
3,012,166	-		AO356_13245	0.68	+0.9
3,012,166	-		AO356_13245	0.68	-1.4
3,012,166	-		AO356_13245	0.68	-0.9
3,012,166	-		AO356_13245	0.68	+0.5
3,012,166	-		AO356_13245	0.68	-2.0
3,012,166	-		AO356_13245	0.68	-0.5
3,012,166	-		AO356_13245	0.68	-0.0
3,012,195	+		AO356_13245	0.71	-0.7
3,012,195	+		AO356_13245	0.71	-0.1
3,012,195	+		AO356_13245	0.71	-0.6
3,012,195	+		AO356_13245	0.71	-0.3
3,012,195	+		AO356_13245	0.71	-1.7
3,012,196	-		AO356_13245	0.71	-0.2
3,012,196	-		AO356_13245	0.71	+0.8
3,012,196	-		AO356_13245	0.71	+0.6
3,012,196	-		AO356_13245	0.71	+0.1
3,012,196	-		AO356_13245	0.71	+0.4
3,012,196	-		AO356_13245	0.71	+0.2
3,012,204	+		AO356_13245	0.72	-0.6
3,012,205	-		AO356_13245	0.72	-0.4
3,012,205	-		AO356_13245	0.72	-1.4
3,012,258	+		AO356_13245	0.77	-0.4
3,012,258	+		AO356_13245	0.77	+0.6
3,012,258	+		AO356_13245	0.77	+0.6
3,012,259	-		AO356_13245	0.77	-0.3
3,012,259	-		AO356_13245	0.77	+1.3
3,012,318	+		AO356_13245	0.82	+1.6
3,012,318	+		AO356_13245	0.82	+0.8
3,012,318	+		AO356_13245	0.82	-1.8
3,012,318	+		AO356_13245	0.82	+0.4
3,012,318	+		AO356_13245	0.82	+1.2
3,012,318	+		AO356_13245	0.82	+0.4
3,012,318	+		AO356_13245	0.82	-0.9
3,012,318	+		AO356_13245	0.82	+0.5
3,012,318	+		AO356_13245	0.82	-1.9
3,012,319	-		AO356_13245	0.82	+1.3
3,012,319	-		AO356_13245	0.82	+0.2
3,012,319	-		AO356_13245	0.82	-0.2
3,012,319	-		AO356_13245	0.82	-0.1
3,012,319	-		AO356_13245	0.82	+0.2
3,012,387	+		AO356_13245	0.89	+0.8
3,012,387	+		AO356_13245	0.89	-0.2
3,012,387	+		AO356_13245	0.89	-0.7
3,012,387	+		AO356_13245	0.89	-0.1
3,012,387	+		AO356_13245	0.89	-0.4
3,012,387	+		AO356_13245	0.89	-0.5
3,012,387	+		AO356_13245	0.89	-1.4
3,012,387	+		AO356_13245	0.89	-1.2
3,012,387	+		AO356_13245	0.89	-0.4
3,012,387	+		AO356_13245	0.89	-1.4
3,012,388	-		AO356_13245	0.89	-1.3
3,012,388	-		AO356_13245	0.89	+0.8
3,012,388	-		AO356_13245	0.89	+0.5
3,012,388	-		AO356_13245	0.89	+0.2
3,012,388	-		AO356_13245	0.89	+0.7
3,012,388	-		AO356_13245	0.89	+0.9
3,012,388	-		AO356_13245	0.89	+0.4
3,012,388	-		AO356_13245	0.89	-0.2
3,012,388	-		AO356_13245	0.89	-0.5
3,012,388	-		AO356_13245	0.89	+0.6
3,012,388	-		AO356_13245	0.89	-0.5
3,012,388	-		AO356_13245	0.89	+0.1
3,012,388	-		AO356_13245	0.89	-0.2
3,012,388	-		AO356_13245	0.89	-1.0
3,012,388	-		AO356_13245	0.89	+0.5
3,012,388	-		AO356_13245	0.89	+0.4
3,012,388	-		AO356_13245	0.89	+0.5
3,012,388	-		AO356_13245	0.89	-0.4
3,012,388	-		AO356_13245	0.89	+0.3
3,012,388	-		AO356_13245	0.89	+1.1
3,012,388	-		AO356_13245	0.89	+0.3
3,012,388	-		AO356_13245	0.89	-0.4
3,012,388	-		AO356_13245	0.89	-0.5
3,012,494	+				-0.7
3,012,494	+				+0.6
3,012,495	-				-0.4
3,012,501	+				-0.2
3,012,502	-				-0.3
3,012,552	+				+0.1
3,012,552	+				+0.9
3,012,552	+				+0.2
3,012,674	+				+0.2
3,012,683	+				-1.6
3,012,684	-				-1.0
3,012,684	-				-0.6
3,012,693	+				+1.2
3,012,693	+				+0.4
3,012,693	+				-0.7
3,012,719	-				+0.2
3,012,759	+				-2.2
3,012,759	+				-3.5
3,013,047	+		AO356_13250	0.19	-1.8
3,013,048	-		AO356_13250	0.19	-1.7
3,013,048	-		AO356_13250	0.19	-2.7
3,013,102	-		AO356_13250	0.22	-2.4
3,013,155	-		AO356_13250	0.25	-2.3
3,013,263	+		AO356_13250	0.31	-1.7
3,013,264	-		AO356_13250	0.31	-1.2
3,013,293	+		AO356_13250	0.33	-1.8
3,013,293	+		AO356_13250	0.33	-0.4
3,013,293	+		AO356_13250	0.33	-2.1
3,013,293	+		AO356_13250	0.33	-2.1
3,013,294	-		AO356_13250	0.33	-1.4
3,013,345	+		AO356_13250	0.35	-2.4
3,013,345	+		AO356_13250	0.35	-0.7
3,013,346	-		AO356_13250	0.36	-3.4
3,013,578	+		AO356_13250	0.48	-1.8
3,013,578	+		AO356_13250	0.48	-2.6
3,013,579	-		AO356_13250	0.48	-3.4
3,013,579	-		AO356_13250	0.48	-0.7
3,013,579	-		AO356_13250	0.48	-1.2
3,013,800	+		AO356_13250	0.60	-2.5
3,013,800	+		AO356_13250	0.60	-1.5
3,013,801	-		AO356_13250	0.60	-2.1
3,013,801	-		AO356_13250	0.60	-0.9
3,013,803	+		AO356_13250	0.60	-3.1
3,013,804	-		AO356_13250	0.60	-2.4
3,013,989	+		AO356_13250	0.70	-1.7
3,013,989	+		AO356_13250	0.70	-0.8
3,014,217	+		AO356_13250	0.83	-2.6
3,014,217	+		AO356_13250	0.83	-2.4
3,014,217	+		AO356_13250	0.83	-3.1
3,014,218	-		AO356_13250	0.83	-1.9
3,014,218	-		AO356_13250	0.83	-2.4
3,014,259	+		AO356_13250	0.85	-2.4
3,014,259	+		AO356_13250	0.85	-2.4
3,014,260	-		AO356_13250	0.85	-1.8
3,014,260	-		AO356_13250	0.85	+0.1
3,014,260	-		AO356_13250	0.85	-0.9
3,014,260	-		AO356_13250	0.85	-2.4
3,014,260	-		AO356_13250	0.85	-1.1
3,014,559	+				-0.4
3,014,559	+				-2.4
3,014,559	+				-2.5
3,014,559	+				-0.6
3,014,559	+				-2.2
3,014,559	+				-2.1
3,014,560	-				+0.9
3,014,560	-				-0.0
3,014,560	-				-0.2
3,014,560	-				-0.8
3,014,563	+				-1.9
3,014,563	+				-2.5
3,014,563	+				-2.4
3,014,563	+				-2.3
3,014,563	+				-1.8
3,014,563	+				-3.1
3,014,564	-				+0.2
3,014,564	-				-0.8
3,014,564	-				-0.1
3,014,570	+				-2.2
3,014,570	+				-2.2
3,014,570	+				-1.2
3,014,570	+				-0.7
3,014,571	-				+0.2
3,014,571	-				+0.5
3,014,571	-				+0.1
3,014,681	+				-1.8
3,014,682	-				-1.5
3,014,721	+				-0.9
3,014,721	+				-0.7
3,014,722	-				-0.5
3,014,937	-		AO356_13255	0.11	-0.5
3,015,223	+		AO356_13255	0.35	+2.1
3,015,223	+		AO356_13255	0.35	-0.3
3,015,223	+		AO356_13255	0.35	-0.8
3,015,304	-		AO356_13255	0.42	+0.2
3,015,356	-		AO356_13255	0.46	-0.2
3,015,356	-		AO356_13255	0.46	+0.3
3,015,356	-		AO356_13255	0.46	+0.5
3,015,356	-		AO356_13255	0.46	+0.1
3,015,447	+		AO356_13255	0.53	-0.5
3,015,448	-		AO356_13255	0.54	-1.0
3,015,448	-		AO356_13255	0.54	+0.4