Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12245

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
2,792,844	+		AO356_12240	0.58	+0.8
2,792,844	+		AO356_12240	0.58	+0.6
2,792,845	-		AO356_12240	0.58	+0.2
2,792,871	+		AO356_12240	0.59	-2.0
2,792,871	+		AO356_12240	0.59	-0.7
2,792,871	+		AO356_12240	0.59	+0.7
2,792,871	+		AO356_12240	0.59	-1.5
2,792,872	-		AO356_12240	0.59	-0.3
2,792,872	-		AO356_12240	0.59	-0.7
2,792,872	-		AO356_12240	0.59	-0.2
2,792,872	-		AO356_12240	0.59	-0.1
2,792,884	-		AO356_12240	0.60	-0.7
2,792,890	-		AO356_12240	0.60	-0.5
2,792,890	-		AO356_12240	0.60	+0.1
2,792,899	-		AO356_12240	0.60	-1.4
2,792,970	+		AO356_12240	0.64	-0.2
2,792,970	+		AO356_12240	0.64	-1.7
2,792,970	+		AO356_12240	0.64	-0.3
2,793,028	+		AO356_12240	0.67	+0.4
2,793,028	+		AO356_12240	0.67	+0.1
2,793,029	-		AO356_12240	0.67	-0.1
2,793,064	-		AO356_12240	0.69	+1.0
2,793,064	-		AO356_12240	0.69	-0.2
2,793,066	+		AO356_12240	0.69	+0.2
2,793,066	+		AO356_12240	0.69	+0.3
2,793,066	+		AO356_12240	0.69	-2.3
2,793,066	+		AO356_12240	0.69	+0.0
2,793,066	+		AO356_12240	0.69	-0.8
2,793,066	+		AO356_12240	0.69	+0.0
2,793,066	+		AO356_12240	0.69	-0.3
2,793,066	+		AO356_12240	0.69	-1.7
2,793,067	-		AO356_12240	0.69	+1.2
2,793,067	-		AO356_12240	0.69	-0.3
2,793,072	-		AO356_12240	0.69	-0.7
2,793,108	+		AO356_12240	0.71	-0.3
2,793,159	+		AO356_12240	0.74	+0.7
2,793,159	+		AO356_12240	0.74	-0.1
2,793,159	+		AO356_12240	0.74	-0.3
2,793,159	+		AO356_12240	0.74	+0.1
2,793,159	+		AO356_12240	0.74	-0.5
2,793,159	+		AO356_12240	0.74	-0.3
2,793,162	+		AO356_12240	0.74	+0.8
2,793,162	+		AO356_12240	0.74	+0.1
2,793,162	+		AO356_12240	0.74	-0.2
2,793,162	+		AO356_12240	0.74	-0.6
2,793,162	+		AO356_12240	0.74	+0.2
2,793,162	+		AO356_12240	0.74	-0.3
2,793,162	+		AO356_12240	0.74	-0.7
2,793,163	-		AO356_12240	0.74	-0.1
2,793,163	-		AO356_12240	0.74	+0.7
2,793,228	+		AO356_12240	0.77	+1.5
2,793,243	+		AO356_12240	0.78	-0.3
2,793,243	+		AO356_12240	0.78	+2.7
2,793,244	-		AO356_12240	0.78	+0.1
2,793,244	-		AO356_12240	0.78	-0.1
2,793,244	-		AO356_12240	0.78	-0.8
2,793,244	-		AO356_12240	0.78	-0.9
2,793,390	+		AO356_12240	0.86	+0.3
2,793,390	+		AO356_12240	0.86	+0.2
2,793,390	+		AO356_12240	0.86	+0.1
2,793,390	+		AO356_12240	0.86	+0.1
2,793,391	-		AO356_12240	0.86	-0.3
2,793,450	+		AO356_12240	0.89	+0.3
2,793,450	+		AO356_12240	0.89	+0.4
2,793,451	-		AO356_12240	0.89	-0.3
2,793,451	-		AO356_12240	0.89	+0.0
2,793,451	-		AO356_12240	0.89	+0.4
2,793,552	+				-0.2
2,793,552	+				-0.3
2,793,552	+				-0.5
2,793,552	+				+0.1
2,793,553	-				-1.0
2,793,553	-				-0.2
2,793,553	-				+0.6
2,793,553	-				-0.4
2,793,553	-				-0.2
2,793,553	-				+0.4
2,793,553	-				-0.1
2,793,606	-				-0.4
2,793,606	-				+0.9
2,793,606	-				+1.9
2,793,606	-				+0.7
2,793,606	-				-0.1
2,793,659	+				-0.7
2,793,660	-				+0.2
2,793,682	+				-0.5
2,793,682	+				+0.1
2,793,682	+				-0.3
2,793,683	-				-0.2
2,793,683	-				-0.4
2,793,683	-				-0.3
2,793,683	-				-1.2
2,793,683	-				+0.3
2,793,683	-				+0.6
2,793,739	+				+0.3
2,793,739	+				-0.7
2,793,739	+				-0.1
2,793,740	-				+0.4
2,793,845	+				+0.3
2,793,846	-				+0.7
2,793,969	+				+0.1
2,793,970	-				+1.2
2,793,970	-				-1.8
2,794,032	-				-0.1
2,794,415	+		AO356_12245	0.22	-0.0
2,794,415	+		AO356_12245	0.22	-0.2
2,794,415	+		AO356_12245	0.22	+1.7
2,794,416	-		AO356_12245	0.22	+0.8
2,794,559	+		AO356_12245	0.27	-0.6
2,794,559	+		AO356_12245	0.27	-1.5
2,794,559	+		AO356_12245	0.27	+0.3
2,794,559	+		AO356_12245	0.27	+0.7
2,794,560	-		AO356_12245	0.28	+0.3
2,794,560	-		AO356_12245	0.28	-0.2
2,794,560	-		AO356_12245	0.28	-0.2
2,794,829	+		AO356_12245	0.38	+0.5
2,795,270	+		AO356_12245	0.54	-0.6
2,795,271	-		AO356_12245	0.54	-0.2
2,795,271	-		AO356_12245	0.54	-1.1
2,795,453	+		AO356_12245	0.61	-0.2
2,796,044	+		AO356_12245	0.83	-0.1
2,796,044	+		AO356_12245	0.83	+0.1
2,796,044	+		AO356_12245	0.83	+0.1
2,796,044	+		AO356_12245	0.83	+0.1
2,796,045	-		AO356_12245	0.83	-0.3
2,796,197	+		AO356_12245	0.89	+0.6
2,796,197	+		AO356_12245	0.89	+0.8
2,796,197	+		AO356_12245	0.89	+0.6
2,796,398	+				+1.8
2,796,398	+				+1.0
2,796,398	+				-0.2
2,796,399	-				+0.5
2,796,399	-				-0.3
2,796,399	-				+1.5
2,796,399	-				+1.4
2,796,399	-				-0.2
2,796,399	-				-1.6
2,796,399	-				-0.8
2,796,406	-				+0.8
2,796,449	+				-0.6
2,796,450	-				+0.7
2,796,450	-				+0.5
2,796,546	+				+0.7
2,796,547	-				+0.2
2,796,547	-				+0.5
2,796,547	-				+0.1
2,796,560	+				-0.3
2,796,560	+				-0.2
2,796,561	-				-0.5
2,796,561	-				+0.2
2,796,563	+				+0.7
2,796,563	+				+0.2
2,796,563	+				+0.7
2,796,563	+				-0.1
2,796,563	+				+0.9
2,796,564	-				+0.8
2,796,564	-				-0.5
2,796,601	+		AO356_12250	0.10	-1.7
2,796,601	+		AO356_12250	0.10	-0.5
2,796,601	+		AO356_12250	0.10	+0.5
2,796,601	+		AO356_12250	0.10	+0.5
2,796,602	-		AO356_12250	0.10	+0.3
2,796,602	-		AO356_12250	0.10	+0.7
2,796,602	-		AO356_12250	0.10	-1.4
2,796,602	-		AO356_12250	0.10	-0.0
2,796,602	-		AO356_12250	0.10	-0.0
2,796,700	-		AO356_12250	0.20	-0.0
2,796,759	+		AO356_12250	0.25	-0.4
2,796,759	+		AO356_12250	0.25	-0.2
2,796,759	+		AO356_12250	0.25	+0.7
2,796,759	+		AO356_12250	0.25	+0.8
2,796,906	+		AO356_12250	0.39	-0.6
2,796,906	+		AO356_12250	0.39	+0.9
2,796,906	+		AO356_12250	0.39	-0.1
2,796,907	-		AO356_12250	0.39	+0.9
2,796,907	-		AO356_12250	0.39	+0.3
2,796,936	+		AO356_12250	0.42	-0.5
2,796,937	-		AO356_12250	0.42	-0.3
2,796,999	+		AO356_12250	0.48	+1.3
2,796,999	+		AO356_12250	0.48	-1.1
2,797,000	-		AO356_12250	0.48	-0.5
2,797,089	+		AO356_12250	0.57	-0.1
2,797,089	+		AO356_12250	0.57	+1.3
2,797,090	-		AO356_12250	0.57	-1.3
2,797,233	+		AO356_12250	0.70	+0.2
2,797,234	-		AO356_12250	0.70	-0.1
2,797,234	-		AO356_12250	0.70	-0.2
2,797,310	-		AO356_12250	0.77	+1.1
2,797,473	+				-0.0
2,797,473	+				-0.3