Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03533

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,689,395	+		CCNA_03532	0.43	+0.6
3,689,444	+		CCNA_03532	0.46	-1.6
3,689,444	+		CCNA_03532	0.46	-0.1
3,689,453	+		CCNA_03532	0.46	+1.1
3,689,461	-		CCNA_03532	0.47	-1.0
3,689,466	-		CCNA_03532	0.47	-0.8
3,689,481	+		CCNA_03532	0.48	+0.5
3,689,489	-		CCNA_03532	0.48	-2.6
3,689,531	-		CCNA_03532	0.51	-1.9
3,689,568	+		CCNA_03532	0.53	-0.1
3,689,570	-		CCNA_03532	0.53	-1.4
3,689,593	-		CCNA_03532	0.54	-2.5
3,689,593	-		CCNA_03532	0.54	-1.3
3,689,597	-		CCNA_03532	0.54	-2.3
3,689,625	-		CCNA_03532	0.56	-0.4
3,689,656	+		CCNA_03532	0.58	+0.7
3,689,719	+		CCNA_03532	0.61	+0.3
3,689,723	-		CCNA_03532	0.62	-1.5
3,689,726	+		CCNA_03532	0.62	-1.1
3,689,766	-		CCNA_03532	0.64	-0.3
3,689,766	-		CCNA_03532	0.64	-0.8
3,689,766	-		CCNA_03532	0.64	-0.6
3,689,766	-		CCNA_03532	0.64	+0.1
3,689,785	+		CCNA_03532	0.65	+0.9
3,689,818	-		CCNA_03532	0.67	+0.2
3,689,891	+		CCNA_03532	0.71	-0.1
3,689,891	+		CCNA_03532	0.71	+0.1
3,689,891	+		CCNA_03532	0.71	-1.3
3,689,891	+		CCNA_03532	0.71	-2.2
3,689,902	+		CCNA_03532	0.72	-0.3
3,689,902	+		CCNA_03532	0.72	-0.9
3,689,910	-		CCNA_03532	0.72	-0.2
3,689,922	-		CCNA_03532	0.73	-0.3
3,689,961	-		CCNA_03532	0.75	+1.1
3,689,986	+		CCNA_03532	0.77	-0.2
3,689,998	+		CCNA_03532	0.77	-0.6
3,689,998	+		CCNA_03532	0.77	+0.3
3,689,998	+		CCNA_03532	0.77	-0.2
3,690,004	+		CCNA_03532	0.78	+0.8
3,690,012	-		CCNA_03532	0.78	-0.0
3,690,045	-		CCNA_03532	0.80	-0.0
3,690,053	-		CCNA_03532	0.80	-0.0
3,690,058	+		CCNA_03532	0.81	+1.3
3,690,058	+		CCNA_03532	0.81	+1.7
3,690,063	+		CCNA_03532	0.81	-0.7
3,690,066	-		CCNA_03532	0.81	-0.4
3,690,066	-		CCNA_03532	0.81	-0.2
3,690,070	+		CCNA_03532	0.81	-0.2
3,690,071	-		CCNA_03532	0.81	-1.3
3,690,077	+		CCNA_03532	0.82	+0.3
3,690,080	-		CCNA_03532	0.82	-2.4
3,690,092	+		CCNA_03532	0.83	+0.7
3,690,092	+		CCNA_03532	0.83	+0.7
3,690,098	+		CCNA_03532	0.83	+1.6
3,690,098	+		CCNA_03532	0.83	-0.6
3,690,106	+		CCNA_03532	0.83	-1.0
3,690,106	-		CCNA_03532	0.83	-0.2
3,690,106	-		CCNA_03532	0.83	-0.1
3,690,108	+		CCNA_03532	0.84	-0.0
3,690,108	+		CCNA_03532	0.84	+1.7
3,690,108	+		CCNA_03532	0.84	-0.6
3,690,108	+		CCNA_03532	0.84	-0.0
3,690,108	+		CCNA_03532	0.84	-0.1
3,690,108	+		CCNA_03532	0.84	-1.0
3,690,113	+		CCNA_03532	0.84	+0.8
3,690,113	+		CCNA_03532	0.84	+2.6
3,690,116	-		CCNA_03532	0.84	+0.5
3,690,116	-		CCNA_03532	0.84	-0.5
3,690,116	-		CCNA_03532	0.84	+0.2
3,690,116	-		CCNA_03532	0.84	-0.7
3,690,116	-		CCNA_03532	0.84	+0.4
3,690,116	-		CCNA_03532	0.84	-0.2
3,690,121	-		CCNA_03532	0.84	+0.8
3,690,121	-		CCNA_03532	0.84	-1.1
3,690,121	-		CCNA_03532	0.84	+0.6
3,690,139	+		CCNA_03532	0.85	+0.3
3,690,153	-		CCNA_03532	0.86	-0.5
3,690,160	+		CCNA_03532	0.87	+0.5
3,690,182	-				+1.4
3,690,205	+		CCNA_03532	0.89	-1.4
3,690,205	+		CCNA_03532	0.89	-0.5
3,690,252	+				+0.6
3,690,279	+				-1.7
3,690,287	-				-0.4
3,690,324	-				+0.2
3,690,372	+				+0.1
3,690,372	+				-0.2
3,690,372	+				+0.7
3,690,372	+				-0.9
3,690,372	+				+0.7
3,690,372	+				-1.1
3,690,372	+				+0.5
3,690,372	+				-0.2
3,690,372	+				+1.6
3,690,372	+				+3.3
3,690,372	+				-0.1
3,690,372	+				+0.5
3,690,372	+				+0.6
3,690,372	+				+0.5
3,690,380	-				+0.9
3,690,380	-				-0.4
3,690,380	-				+1.5
3,690,380	-				+0.5
3,690,380	-				+0.2
3,690,380	-				+0.3
3,690,380	-				+0.4
3,690,380	-				+0.5
3,690,380	-				-0.1
3,690,380	-				+1.7
3,690,380	-				+1.4
3,690,383	+				+3.9
3,690,383	+				+1.2
3,690,383	+				-0.5
3,690,405	-				+1.1
3,690,477	-				+0.6
3,690,477	-				+1.0
3,690,493	+				+0.1
3,690,503	+				-0.0
3,690,521	-				+0.6
3,690,584	-		CCNA_03533	0.12	-0.1
3,690,653	-		CCNA_03533	0.15	+0.7
3,690,653	-		CCNA_03533	0.15	-0.4
3,690,659	+		CCNA_03533	0.16	+2.3
3,690,714	+		CCNA_03533	0.19	-1.3
3,690,718	-		CCNA_03533	0.19	+1.5
3,690,721	+		CCNA_03533	0.19	+0.8
3,690,721	+		CCNA_03533	0.19	+1.4
3,690,723	-		CCNA_03533	0.19	-0.3
3,690,737	+		CCNA_03533	0.20	+0.1
3,690,737	+		CCNA_03533	0.20	+0.8
3,690,772	+		CCNA_03533	0.22	-0.6
3,690,801	-		CCNA_03533	0.24	+0.2
3,690,816	+		CCNA_03533	0.25	-0.6
3,690,842	-		CCNA_03533	0.26	+0.7
3,690,850	-		CCNA_03533	0.26	+1.4
3,690,876	+		CCNA_03533	0.28	+0.4
3,690,876	+		CCNA_03533	0.28	+0.6
3,690,884	-		CCNA_03533	0.28	+2.7
3,690,913	-		CCNA_03533	0.30	+0.4
3,690,931	-		CCNA_03533	0.31	-0.2
3,690,931	-		CCNA_03533	0.31	+1.0
3,690,933	+		CCNA_03533	0.31	-1.3
3,690,934	+		CCNA_03533	0.31	-0.1
3,690,962	+		CCNA_03533	0.33	-0.9
3,690,966	+		CCNA_03533	0.33	-0.6
3,691,103	+		CCNA_03533	0.41	-0.2
3,691,103	+		CCNA_03533	0.41	+0.1
3,691,111	-		CCNA_03533	0.41	-0.7
3,691,114	+		CCNA_03533	0.41	-2.1
3,691,164	+		CCNA_03533	0.44	-2.4
3,691,190	+		CCNA_03533	0.45	-0.4
3,691,198	+		CCNA_03533	0.46	-0.6
3,691,198	+		CCNA_03533	0.46	-0.2
3,691,198	-		CCNA_03533	0.46	-0.8
3,691,199	-		CCNA_03533	0.46	-0.8
3,691,199	-		CCNA_03533	0.46	-1.3
3,691,199	-		CCNA_03533	0.46	+0.1
3,691,238	+		CCNA_03533	0.48	-1.6
3,691,283	-		CCNA_03533	0.51	-0.2
3,691,294	+		CCNA_03533	0.51	-0.3
3,691,302	-		CCNA_03533	0.52	+0.7
3,691,302	-		CCNA_03533	0.52	-0.0
3,691,311	+		CCNA_03533	0.52	+0.3
3,691,312	-		CCNA_03533	0.52	+0.7
3,691,323	+		CCNA_03533	0.53	+0.3
3,691,324	+		CCNA_03533	0.53	-2.1
3,691,329	+		CCNA_03533	0.53	-1.2
3,691,329	+		CCNA_03533	0.53	-1.1
3,691,332	-		CCNA_03533	0.53	+1.7
3,691,332	-		CCNA_03533	0.53	-0.4
3,691,332	-		CCNA_03533	0.53	+0.3
3,691,332	-		CCNA_03533	0.53	+0.7
3,691,334	+		CCNA_03533	0.53	-1.6
3,691,337	-		CCNA_03533	0.54	+0.4
3,691,337	-		CCNA_03533	0.54	+0.9
3,691,356	-		CCNA_03533	0.55	+1.4
3,691,361	+		CCNA_03533	0.55	-0.3
3,691,362	+		CCNA_03533	0.55	+0.4
3,691,370	-		CCNA_03533	0.55	+0.7
3,691,370	-		CCNA_03533	0.55	+0.5
3,691,373	+		CCNA_03533	0.56	-0.6
3,691,431	+		CCNA_03533	0.59	-0.6
3,691,432	+		CCNA_03533	0.59	-0.4
3,691,443	+		CCNA_03533	0.60	-0.6
3,691,481	-		CCNA_03533	0.62	-1.1
3,691,487	+		CCNA_03533	0.62	+2.2
3,691,487	+		CCNA_03533	0.62	+1.9
3,691,487	+		CCNA_03533	0.62	+1.8
3,691,495	-		CCNA_03533	0.62	-0.6
3,691,506	+		CCNA_03533	0.63	-2.7
3,691,514	-		CCNA_03533	0.63	+1.1
3,691,514	-		CCNA_03533	0.63	+1.4
3,691,522	+		CCNA_03533	0.64	-1.2
3,691,545	-		CCNA_03533	0.65	-0.0
3,691,609	+		CCNA_03533	0.69	-1.1
3,691,617	-		CCNA_03533	0.69	+0.5
3,691,657	+		CCNA_03533	0.71	-1.9
3,691,665	-		CCNA_03533	0.72	-2.8
3,691,681	+		CCNA_03533	0.73	-1.6
3,691,688	-		CCNA_03533	0.73	-0.3
3,691,691	+		CCNA_03533	0.73	-0.2
3,691,699	-		CCNA_03533	0.74	-0.1
3,691,699	-		CCNA_03533	0.74	+0.8
3,691,732	-		CCNA_03533	0.76	-1.4
3,691,733	-		CCNA_03533	0.76	-0.8
3,691,741	+		CCNA_03533	0.76	-1.1
3,691,749	-		CCNA_03533	0.77	+1.0
3,691,803	+		CCNA_03533	0.80	-0.6
3,691,803	-		CCNA_03533	0.80	-0.8
3,691,811	-		CCNA_03533	0.80	-0.2
3,691,811	-		CCNA_03533	0.80	-0.5
3,691,811	-		CCNA_03533	0.80	-1.2
3,691,811	-		CCNA_03533	0.80	-0.4
3,691,816	-		CCNA_03533	0.80	-1.0
3,691,821	+		CCNA_03533	0.81	-2.7
3,691,845	+		CCNA_03533	0.82	+1.8
3,691,846	-		CCNA_03533	0.82	+0.4
3,691,859	+		CCNA_03533	0.83	-0.7
3,691,882	+		CCNA_03533	0.84	-1.6
3,691,885	-		CCNA_03533	0.84	+0.3
3,691,885	-		CCNA_03533	0.84	+0.6
3,691,936	+		CCNA_03533	0.87	-1.9
3,691,936	+		CCNA_03533	0.87	-2.4
3,691,941	+		CCNA_03533	0.87	-3.1
3,691,941	+		CCNA_03533	0.87	+2.1
3,691,941	+		CCNA_03533	0.87	-2.5
3,691,941	+		CCNA_03533	0.87	-1.9
3,691,941	+		CCNA_03533	0.87	+0.6
3,691,941	+		CCNA_03533	0.87	-2.4
3,691,941	+		CCNA_03533	0.87	-2.5
3,691,941	+		CCNA_03533	0.87	-1.8
3,691,941	+		CCNA_03533	0.87	-2.2
3,691,941	+		CCNA_03533	0.87	-2.3
3,691,941	+		CCNA_03533	0.87	-1.8
3,691,944	-		CCNA_03533	0.87	+0.6
3,691,944	-		CCNA_03533	0.87	+1.8
3,691,944	-		CCNA_03533	0.87	-0.2
3,691,949	-		CCNA_03533	0.88	+0.1
3,691,949	-		CCNA_03533	0.88	+0.8
3,691,949	-		CCNA_03533	0.88	+0.5
3,691,949	-		CCNA_03533	0.88	-0.1
3,691,949	-		CCNA_03533	0.88	-1.1
3,691,983	-		CCNA_03533	0.90	+0.2
3,691,983	-		CCNA_03533	0.90	+0.2
3,691,996	+				-1.6
3,691,996	+				-2.4
3,691,996	+				+1.4
3,691,996	+				-1.8
3,691,996	+				-1.1
3,691,996	+				-1.0
3,692,002	+				-0.4
3,692,004	-				+2.6
3,692,004	-				-0.1
3,692,004	-				-0.2
3,692,004	-				+0.7
3,692,004	-				+0.9
3,692,004	-				+0.3
3,692,004	-				-0.7
3,692,034	+				-0.1
3,692,042	-				+0.7
3,692,042	-				+1.0
3,692,045	+				-1.5
3,692,053	-				+0.9
3,692,063	-				+0.1
3,692,063	-				+0.7
3,692,073	+				-1.4
3,692,102	-				+0.3
3,692,102	-				+0.6
3,692,102	-				+1.8
3,692,117	-				-0.8
3,692,178	+				+0.5
3,692,185	-				-1.4
3,692,185	-				+0.5
3,692,207	-				-2.0
3,692,256	-				-1.7
3,692,272	+				-2.4
3,692,301	+				+0.5
3,692,324	+				+0.2
3,692,332	-				+0.9
3,692,332	-				+0.5
3,692,332	-				-0.2
3,692,332	-				+1.1
3,692,332	-				+0.3
3,692,340	+				-3.7
3,692,340	+				-2.6
3,692,340	+				-0.5
3,692,371	-				+0.9
3,692,393	+				-0.2
3,692,441	+				+1.1
3,692,468	+				-2.2
3,692,476	-				+0.1
3,692,484	+				-1.2
3,692,484	+				-0.0
3,692,554	-				-1.4
3,692,574	-				-1.1
3,692,642	+				-3.2
3,692,667	+				+0.4
3,692,702	+				-2.6
3,692,707	+				-1.6
3,692,712	+				-1.2
3,692,715	-				-0.2
3,692,766	+				-2.3
3,692,809	-				-0.8
3,692,809	-				-1.2
3,692,811	+				-1.1
3,692,817	-				-2.3
3,692,826	+				-1.8
3,692,831	+				-2.4
3,692,831	+				-1.6
3,692,834	-				-1.4
3,692,834	-				-0.4
3,692,834	-				-0.8
3,692,834	-				-0.2
3,692,839	-				+0.1
3,692,839	-				-0.2
3,692,839	-				-0.1
3,692,839	-				-2.2
3,692,846	-				-1.1
3,692,846	-				+0.1
3,692,931	+				-1.2
3,692,931	+				-1.4
3,692,931	+				-0.6
3,692,931	+				-0.9
3,692,939	-				-1.0
3,692,939	-				-1.2
3,692,939	-				-0.8
3,692,939	-				-1.7
3,692,939	-				-0.7