Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS03670 and ABIE51_RS03675 are separated by 65 nucleotides ABIE51_RS03675 and ABIE51_RS03680 are separated by 107 nucleotides
ABIE51_RS03670: ABIE51_RS03670 - endo-1,4-beta-xylanase, at 808,151 to 809,257
_RS03670
ABIE51_RS03675: ABIE51_RS03675 - beta-galactosidase GalB, at 809,323 to 811,962
_RS03675
ABIE51_RS03680: ABIE51_RS03680 - glucuronate isomerase, at 812,070 to 813,488
_RS03680
Position (kb) 809
810
811
812 Strain fitness (log2 ratio) -1
0
1 at 808.719 kb on + strand, within ABIE51_RS03670 at 808.720 kb on - strand, within ABIE51_RS03670 at 808.879 kb on - strand, within ABIE51_RS03670 at 808.879 kb on - strand, within ABIE51_RS03670 at 808.879 kb on - strand, within ABIE51_RS03670 at 808.902 kb on + strand, within ABIE51_RS03670 at 809.014 kb on - strand, within ABIE51_RS03670 at 809.723 kb on + strand, within ABIE51_RS03675 at 809.723 kb on + strand, within ABIE51_RS03675 at 809.957 kb on + strand, within ABIE51_RS03675 at 809.960 kb on + strand, within ABIE51_RS03675 at 810.020 kb on + strand, within ABIE51_RS03675 at 810.021 kb on - strand, within ABIE51_RS03675 at 810.023 kb on + strand, within ABIE51_RS03675 at 810.023 kb on + strand, within ABIE51_RS03675 at 810.383 kb on + strand, within ABIE51_RS03675 at 810.531 kb on - strand, within ABIE51_RS03675 at 810.576 kb on + strand, within ABIE51_RS03675 at 810.814 kb on + strand, within ABIE51_RS03675 at 810.814 kb on + strand, within ABIE51_RS03675 at 810.815 kb on - strand, within ABIE51_RS03675 at 811.313 kb on - strand, within ABIE51_RS03675 at 811.410 kb on - strand, within ABIE51_RS03675 at 811.607 kb on + strand, within ABIE51_RS03675 at 811.798 kb on + strand at 811.799 kb on - strand at 812.260 kb on + strand, within ABIE51_RS03680 at 812.261 kb on - strand, within ABIE51_RS03680 at 812.261 kb on - strand, within ABIE51_RS03680 at 812.261 kb on - strand, within ABIE51_RS03680 at 812.357 kb on - strand, within ABIE51_RS03680 at 812.390 kb on - strand, within ABIE51_RS03680 at 812.476 kb on + strand, within ABIE51_RS03680 at 812.476 kb on + strand, within ABIE51_RS03680 at 812.810 kb on + strand, within ABIE51_RS03680 at 812.810 kb on + strand, within ABIE51_RS03680 at 812.812 kb on + strand, within ABIE51_RS03680 at 812.935 kb on - strand, within ABIE51_RS03680
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 808,719 + ABIE51_RS03670 0.51 +0.6 808,720 - ABIE51_RS03670 0.51 -0.1 808,879 - ABIE51_RS03670 0.66 +0.5 808,879 - ABIE51_RS03670 0.66 -0.0 808,879 - ABIE51_RS03670 0.66 -0.4 808,902 + ABIE51_RS03670 0.68 +0.6 809,014 - ABIE51_RS03670 0.78 -0.1 809,723 + ABIE51_RS03675 0.15 -0.9 809,723 + ABIE51_RS03675 0.15 +0.4 809,957 + ABIE51_RS03675 0.24 -0.1 809,960 + ABIE51_RS03675 0.24 -0.8 810,020 + ABIE51_RS03675 0.26 +0.4 810,021 - ABIE51_RS03675 0.26 -0.8 810,023 + ABIE51_RS03675 0.27 -0.6 810,023 + ABIE51_RS03675 0.27 -0.4 810,383 + ABIE51_RS03675 0.40 +0.6 810,531 - ABIE51_RS03675 0.46 -0.1 810,576 + ABIE51_RS03675 0.47 +0.4 810,814 + ABIE51_RS03675 0.56 -0.0 810,814 + ABIE51_RS03675 0.56 -0.1 810,815 - ABIE51_RS03675 0.57 -0.3 811,313 - ABIE51_RS03675 0.75 +0.1 811,410 - ABIE51_RS03675 0.79 -1.0 811,607 + ABIE51_RS03675 0.87 -0.2 811,798 + -1.0 811,799 - +0.8 812,260 + ABIE51_RS03680 0.13 -0.1 812,261 - ABIE51_RS03680 0.13 +0.2 812,261 - ABIE51_RS03680 0.13 -0.6 812,261 - ABIE51_RS03680 0.13 +0.3 812,357 - ABIE51_RS03680 0.20 +0.0 812,390 - ABIE51_RS03680 0.23 +0.2 812,476 + ABIE51_RS03680 0.29 -1.1 812,476 + ABIE51_RS03680 0.29 -0.2 812,810 + ABIE51_RS03680 0.52 +1.0 812,810 + ABIE51_RS03680 0.52 +0.8 812,812 + ABIE51_RS03680 0.52 +0.6 812,935 - ABIE51_RS03680 0.61 -0.1
Or see this region's nucleotide sequence