Experiment: R2A with Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS26260 and RR42_RS26265 are separated by 485 nucleotides RR42_RS26265 and RR42_RS26270 are separated by 727 nucleotides
RR42_RS26260: RR42_RS26260 - hypothetical protein, at 1,250,573 to 1,251,274
_RS26260
RR42_RS26265: RR42_RS26265 - hypothetical protein, at 1,251,760 to 1,251,990
_RS26265
RR42_RS26270: RR42_RS26270 - hydroperoxidase, at 1,252,718 to 1,254,955
_RS26270
Position (kb) 1251
1252 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1250.760 kb on + strand, within RR42_RS26260 at 1250.761 kb on - strand, within RR42_RS26260 at 1250.761 kb on - strand, within RR42_RS26260 at 1251.063 kb on - strand, within RR42_RS26260 at 1251.063 kb on - strand, within RR42_RS26260 at 1251.208 kb on + strand at 1251.279 kb on + strand at 1251.279 kb on + strand at 1251.280 kb on - strand at 1251.301 kb on + strand at 1251.448 kb on - strand at 1251.462 kb on + strand at 1251.463 kb on - strand at 1251.463 kb on - strand at 1251.488 kb on + strand at 1251.491 kb on + strand at 1251.491 kb on + strand at 1251.491 kb on + strand at 1251.491 kb on + strand at 1251.492 kb on - strand at 1251.518 kb on + strand at 1251.518 kb on + strand at 1251.519 kb on - strand at 1251.760 kb on + strand at 1251.761 kb on - strand at 1251.761 kb on - strand at 1251.824 kb on + strand, within RR42_RS26265 at 1252.253 kb on + strand at 1252.253 kb on + strand at 1252.253 kb on + strand at 1252.253 kb on + strand at 1252.253 kb on + strand at 1252.254 kb on - strand at 1252.254 kb on - strand at 1252.254 kb on - strand at 1252.325 kb on + strand at 1252.325 kb on + strand at 1252.325 kb on + strand at 1252.325 kb on + strand at 1252.325 kb on + strand at 1252.326 kb on - strand at 1252.326 kb on - strand at 1252.333 kb on + strand at 1252.333 kb on + strand at 1252.333 kb on + strand at 1252.334 kb on - strand at 1252.334 kb on - strand at 1252.334 kb on - strand at 1252.334 kb on - strand at 1252.385 kb on - strand at 1252.412 kb on + strand at 1252.412 kb on + strand at 1252.413 kb on - strand at 1252.424 kb on + strand at 1252.425 kb on - strand at 1252.425 kb on - strand at 1252.425 kb on - strand at 1252.547 kb on - strand at 1252.547 kb on - strand at 1252.692 kb on - strand at 1252.705 kb on + strand at 1252.706 kb on - strand at 1252.859 kb on + strand at 1252.859 kb on + strand at 1252.962 kb on - strand, within RR42_RS26270
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Cobalt chloride 0.5 mM remove 1,250,760 + RR42_RS26260 0.27 -1.9 1,250,761 - RR42_RS26260 0.27 -0.2 1,250,761 - RR42_RS26260 0.27 -0.9 1,251,063 - RR42_RS26260 0.70 +0.9 1,251,063 - RR42_RS26260 0.70 -0.6 1,251,208 + +0.6 1,251,279 + -1.7 1,251,279 + -2.2 1,251,280 - -1.9 1,251,301 + -0.4 1,251,448 - -0.1 1,251,462 + +0.9 1,251,463 - -1.4 1,251,463 - -0.7 1,251,488 + +1.0 1,251,491 + +0.3 1,251,491 + +0.1 1,251,491 + -0.8 1,251,491 + -0.9 1,251,492 - -0.5 1,251,518 + +0.0 1,251,518 + -0.7 1,251,519 - +0.7 1,251,760 + +0.4 1,251,761 - +1.1 1,251,761 - -0.1 1,251,824 + RR42_RS26265 0.28 -0.4 1,252,253 + -1.1 1,252,253 + +2.1 1,252,253 + +0.6 1,252,253 + +0.9 1,252,253 + -1.8 1,252,254 - +0.6 1,252,254 - -1.6 1,252,254 - -0.4 1,252,325 + +1.6 1,252,325 + -0.3 1,252,325 + -0.9 1,252,325 + -0.2 1,252,325 + -0.1 1,252,326 - +0.3 1,252,326 - -0.6 1,252,333 + +0.3 1,252,333 + +0.3 1,252,333 + -0.5 1,252,334 - -0.9 1,252,334 - +0.6 1,252,334 - +0.9 1,252,334 - -2.2 1,252,385 - +0.1 1,252,412 + +0.6 1,252,412 + +0.4 1,252,413 - -1.3 1,252,424 + +0.4 1,252,425 - -1.4 1,252,425 - +1.0 1,252,425 - +0.1 1,252,547 - -0.3 1,252,547 - -0.6 1,252,692 - +0.7 1,252,705 + -1.4 1,252,706 - +1.3 1,252,859 + -0.1 1,252,859 + -0.2 1,252,962 - RR42_RS26270 0.11 +0.7
Or see this region's nucleotide sequence