Experiment: R2A with Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS11650 and RR42_RS11655 are separated by 155 nucleotides RR42_RS11655 and RR42_RS11660 are separated by 199 nucleotides RR42_RS11660 and RR42_RS11665 are separated by 110 nucleotides RR42_RS11665 and RR42_RS11670 are separated by 153 nucleotides
RR42_RS11650: RR42_RS11650 - poly-beta-hydroxybutyrate polymerase, at 2,495,522 to 2,497,309
_RS11650
RR42_RS11655: RR42_RS11655 - heat-shock protein Hsp20, at 2,497,465 to 2,497,887
_RS11655
RR42_RS11660: RR42_RS11660 - hypothetical protein, at 2,498,087 to 2,498,269
_RS11660
RR42_RS11665: RR42_RS11665 - hypothetical protein, at 2,498,380 to 2,498,571
_RS11665
RR42_RS11670: RR42_RS11670 - thymidine phosphorylase, at 2,498,725 to 2,500,257
_RS11670
Position (kb)
2497
2498 Strain fitness (log2 ratio)
-2
-1
0
1 at 2496.493 kb on + strand, within RR42_RS11650 at 2496.493 kb on + strand, within RR42_RS11650 at 2496.510 kb on - strand, within RR42_RS11650 at 2496.695 kb on + strand, within RR42_RS11650 at 2496.695 kb on + strand, within RR42_RS11650 at 2496.776 kb on + strand, within RR42_RS11650 at 2496.908 kb on + strand, within RR42_RS11650 at 2496.909 kb on - strand, within RR42_RS11650 at 2497.007 kb on + strand, within RR42_RS11650 at 2497.142 kb on + strand at 2497.143 kb on - strand at 2497.143 kb on - strand at 2497.160 kb on + strand at 2497.293 kb on - strand at 2497.539 kb on - strand, within RR42_RS11655 at 2497.719 kb on + strand, within RR42_RS11655 at 2497.869 kb on - strand at 2498.168 kb on + strand, within RR42_RS11660 at 2498.169 kb on - strand, within RR42_RS11660 at 2498.231 kb on + strand, within RR42_RS11660 at 2498.381 kb on + strand at 2498.382 kb on - strand at 2498.552 kb on + strand at 2498.552 kb on + strand at 2498.553 kb on - strand at 2498.731 kb on - strand at 2498.731 kb on - strand at 2498.788 kb on + strand at 2498.788 kb on + strand at 2498.806 kb on + strand at 2498.806 kb on + strand at 2498.806 kb on + strand at 2498.806 kb on + strand at 2498.807 kb on - strand at 2498.807 kb on - strand at 2498.807 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Cobalt chloride 0.5 mM remove 2,496,493 + RR42_RS11650 0.54 +1.6 2,496,493 + RR42_RS11650 0.54 -0.2 2,496,510 - RR42_RS11650 0.55 -0.9 2,496,695 + RR42_RS11650 0.66 +1.2 2,496,695 + RR42_RS11650 0.66 -1.0 2,496,776 + RR42_RS11650 0.70 -1.3 2,496,908 + RR42_RS11650 0.78 +0.0 2,496,909 - RR42_RS11650 0.78 +0.5 2,497,007 + RR42_RS11650 0.83 +0.4 2,497,142 + -0.4 2,497,143 - +1.0 2,497,143 - +0.8 2,497,160 + -0.2 2,497,293 - +0.8 2,497,539 - RR42_RS11655 0.17 +0.1 2,497,719 + RR42_RS11655 0.60 -1.9 2,497,869 - -1.4 2,498,168 + RR42_RS11660 0.44 +1.3 2,498,169 - RR42_RS11660 0.45 -0.5 2,498,231 + RR42_RS11660 0.79 -0.2 2,498,381 + +1.2 2,498,382 - +1.2 2,498,552 + +0.3 2,498,552 + +1.0 2,498,553 - +0.3 2,498,731 - +0.8 2,498,731 - -0.4 2,498,788 + -0.2 2,498,788 + +0.3 2,498,806 + +1.2 2,498,806 + -1.7 2,498,806 + -0.1 2,498,806 + +0.2 2,498,807 - +0.8 2,498,807 - +0.8 2,498,807 - +0.7
Or see this region's nucleotide sequence