Experiment: R2A with Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS02730 and RR42_RS02735 are separated by 240 nucleotides RR42_RS02735 and RR42_RS02740 overlap by 20 nucleotides RR42_RS02740 and RR42_RS02745 overlap by 4 nucleotides
RR42_RS02730: RR42_RS02730 - tRNA-dihydrouridine synthase B, at 607,895 to 608,989
_RS02730
RR42_RS02735: RR42_RS02735 - hypothetical protein, at 609,230 to 610,477
_RS02735
RR42_RS02740: RR42_RS02740 - hypothetical protein, at 610,458 to 610,967
_RS02740
RR42_RS02745: RR42_RS02745 - Xaa-Pro aminopeptidase, at 610,964 to 612,346
_RS02745
Position (kb) 609
610
611 Strain fitness (log2 ratio) -1
0
1
2 at 608.257 kb on - strand, within RR42_RS02730 at 608.428 kb on - strand, within RR42_RS02730 at 608.446 kb on - strand, within RR42_RS02730 at 609.013 kb on - strand at 609.013 kb on - strand at 609.050 kb on - strand at 609.050 kb on - strand at 609.166 kb on + strand at 610.868 kb on - strand, within RR42_RS02740 at 610.944 kb on + strand at 611.131 kb on - strand, within RR42_RS02745 at 611.131 kb on - strand, within RR42_RS02745 at 611.131 kb on - strand, within RR42_RS02745 at 611.131 kb on - strand, within RR42_RS02745 at 611.131 kb on - strand, within RR42_RS02745 at 611.275 kb on - strand, within RR42_RS02745 at 611.318 kb on - strand, within RR42_RS02745 at 611.401 kb on - strand, within RR42_RS02745 at 611.401 kb on - strand, within RR42_RS02745 at 611.461 kb on - strand, within RR42_RS02745 at 611.461 kb on - strand, within RR42_RS02745 at 611.461 kb on - strand, within RR42_RS02745 at 611.461 kb on - strand, within RR42_RS02745
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Cobalt chloride 0.5 mM remove 608,257 - RR42_RS02730 0.33 +0.4 608,428 - RR42_RS02730 0.49 -0.6 608,446 - RR42_RS02730 0.50 +0.2 609,013 - -1.1 609,013 - -0.4 609,050 - -0.2 609,050 - -0.3 609,166 + +0.7 610,868 - RR42_RS02740 0.80 -0.0 610,944 + -0.2 611,131 - RR42_RS02745 0.12 +2.2 611,131 - RR42_RS02745 0.12 +0.4 611,131 - RR42_RS02745 0.12 +0.5 611,131 - RR42_RS02745 0.12 +0.5 611,131 - RR42_RS02745 0.12 -0.2 611,275 - RR42_RS02745 0.22 +0.5 611,318 - RR42_RS02745 0.26 +0.8 611,401 - RR42_RS02745 0.32 +0.3 611,401 - RR42_RS02745 0.32 -0.4 611,461 - RR42_RS02745 0.36 +0.4 611,461 - RR42_RS02745 0.36 -0.9 611,461 - RR42_RS02745 0.36 -0.3 611,461 - RR42_RS02745 0.36 +0.7
Or see this region's nucleotide sequence