Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29310 and AO356_29315 are separated by 79 nucleotides AO356_29315 and AO356_29320 overlap by 4 nucleotides
AO356_29310: AO356_29310 - aliphatic sulfonate ABC transporter substrate-binding protein, at 6,816,391 to 6,817,401
_29310
AO356_29315: AO356_29315 - acyl-CoA dehydrogenase, at 6,817,481 to 6,818,668
_29315
AO356_29320: AO356_29320 - dihydrofolate reductase, at 6,818,665 to 6,819,624
_29320
Position (kb)
6817
6818
6819 Strain fitness (log2 ratio)
-1
0
1 at 6816.604 kb on + strand, within AO356_29310 at 6816.838 kb on + strand, within AO356_29310 at 6816.985 kb on + strand, within AO356_29310 at 6816.986 kb on - strand, within AO356_29310 at 6816.986 kb on - strand, within AO356_29310 at 6816.993 kb on - strand, within AO356_29310 at 6817.052 kb on - strand, within AO356_29310 at 6817.066 kb on + strand, within AO356_29310 at 6817.067 kb on - strand, within AO356_29310 at 6817.067 kb on - strand, within AO356_29310 at 6817.129 kb on + strand, within AO356_29310 at 6817.129 kb on + strand, within AO356_29310 at 6817.130 kb on - strand, within AO356_29310 at 6817.130 kb on - strand, within AO356_29310 at 6817.131 kb on + strand, within AO356_29310 at 6817.240 kb on + strand, within AO356_29310 at 6817.240 kb on + strand, within AO356_29310 at 6817.240 kb on + strand, within AO356_29310 at 6817.241 kb on - strand, within AO356_29310 at 6817.241 kb on - strand, within AO356_29310 at 6817.241 kb on - strand, within AO356_29310 at 6817.590 kb on - strand at 6817.973 kb on + strand, within AO356_29315 at 6817.974 kb on - strand, within AO356_29315 at 6818.466 kb on - strand, within AO356_29315 at 6818.839 kb on + strand, within AO356_29320 at 6818.921 kb on - strand, within AO356_29320 at 6818.955 kb on + strand, within AO356_29320 at 6818.955 kb on + strand, within AO356_29320 at 6819.264 kb on - strand, within AO356_29320 at 6819.297 kb on + strand, within AO356_29320 at 6819.472 kb on + strand, within AO356_29320 at 6819.540 kb on - strand at 6819.608 kb on + strand at 6819.609 kb on - strand at 6819.609 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 6,816,604 + AO356_29310 0.21 +0.1 6,816,838 + AO356_29310 0.44 +1.1 6,816,985 + AO356_29310 0.59 +0.1 6,816,986 - AO356_29310 0.59 +0.2 6,816,986 - AO356_29310 0.59 +0.1 6,816,993 - AO356_29310 0.60 -0.1 6,817,052 - AO356_29310 0.65 +0.7 6,817,066 + AO356_29310 0.67 -0.1 6,817,067 - AO356_29310 0.67 -0.2 6,817,067 - AO356_29310 0.67 +0.3 6,817,129 + AO356_29310 0.73 +0.3 6,817,129 + AO356_29310 0.73 +1.7 6,817,130 - AO356_29310 0.73 -0.0 6,817,130 - AO356_29310 0.73 +1.3 6,817,131 + AO356_29310 0.73 -1.1 6,817,240 + AO356_29310 0.84 -0.0 6,817,240 + AO356_29310 0.84 +0.4 6,817,240 + AO356_29310 0.84 -1.1 6,817,241 - AO356_29310 0.84 +0.1 6,817,241 - AO356_29310 0.84 -1.0 6,817,241 - AO356_29310 0.84 +0.3 6,817,590 - +0.1 6,817,973 + AO356_29315 0.41 +0.9 6,817,974 - AO356_29315 0.41 +0.0 6,818,466 - AO356_29315 0.83 -0.4 6,818,839 + AO356_29320 0.18 -0.1 6,818,921 - AO356_29320 0.27 +0.5 6,818,955 + AO356_29320 0.30 +0.6 6,818,955 + AO356_29320 0.30 +0.8 6,819,264 - AO356_29320 0.62 +0.0 6,819,297 + AO356_29320 0.66 -0.2 6,819,472 + AO356_29320 0.84 +0.5 6,819,540 - -0.2 6,819,608 + +1.2 6,819,609 - +0.4 6,819,609 - +0.1
Or see this region's nucleotide sequence