Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03902 and SMc03800 are separated by 91 nucleotides SMc03800 and SMc03801 are separated by 59 nucleotides SMc03801 and SMc03802 are separated by 144 nucleotides SMc03802 and SMc03803 are separated by 8 nucleotides
SMc03902: SMc03902 - tRNA-Gly, at 3,465,466 to 3,465,540
SMc03902
SMc03800: SMc03800 - hypothetical protein, at 3,465,632 to 3,466,306
SMc03800
SMc03801: SMc03801 - thioredoxin protein, at 3,466,366 to 3,467,358
SMc03801
SMc03802: SMc03802 - hypothetical protein, at 3,467,503 to 3,468,183
SMc03802
SMc03803: SMc03803 - hypothetical protein, at 3,468,192 to 3,468,380
SMc03803
Position (kb)
3466
3467
3468 Strain fitness (log2 ratio)
-1
0
1 at 3465.754 kb on + strand, within SMc03800 at 3465.755 kb on - strand, within SMc03800 at 3465.977 kb on + strand, within SMc03800 at 3466.089 kb on - strand, within SMc03800 at 3466.309 kb on + strand at 3466.309 kb on + strand at 3466.309 kb on + strand at 3466.310 kb on - strand at 3466.310 kb on - strand at 3466.387 kb on + strand at 3466.388 kb on - strand at 3466.515 kb on + strand, within SMc03801 at 3466.908 kb on - strand, within SMc03801 at 3466.964 kb on - strand, within SMc03801 at 3467.291 kb on + strand at 3467.356 kb on + strand at 3467.525 kb on - strand at 3467.610 kb on + strand, within SMc03802 at 3467.611 kb on - strand, within SMc03802 at 3467.611 kb on - strand, within SMc03802 at 3467.629 kb on + strand at 3467.748 kb on - strand, within SMc03802 at 3467.797 kb on + strand, within SMc03802 at 3467.797 kb on + strand, within SMc03802 at 3467.797 kb on + strand, within SMc03802 at 3468.022 kb on - strand, within SMc03802 at 3468.172 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,465,754 + SMc03800 0.18 +0.2 3,465,755 - SMc03800 0.18 +0.2 3,465,977 + SMc03800 0.51 +0.3 3,466,089 - SMc03800 0.68 -0.2 3,466,309 + -0.1 3,466,309 + +0.2 3,466,309 + -0.1 3,466,310 - -0.4 3,466,310 - -0.2 3,466,387 + -0.1 3,466,388 - -0.2 3,466,515 + SMc03801 0.15 +0.6 3,466,908 - SMc03801 0.55 +0.4 3,466,964 - SMc03801 0.60 -0.1 3,467,291 + -0.4 3,467,356 + +0.4 3,467,525 - +0.4 3,467,610 + SMc03802 0.16 +0.3 3,467,611 - SMc03802 0.16 -1.5 3,467,611 - SMc03802 0.16 -0.0 3,467,629 + +0.2 3,467,748 - SMc03802 0.36 -1.1 3,467,797 + SMc03802 0.43 +0.7 3,467,797 + SMc03802 0.43 -1.0 3,467,797 + SMc03802 0.43 +0.4 3,468,022 - SMc03802 0.76 -0.4 3,468,172 - -1.1
Or see this region's nucleotide sequence