Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03287 and SMc03288 are separated by 732 nucleotides SMc03288 and SMc03289 are separated by 433 nucleotides
SMc03287: SMc03287 - oxidoreductase, at 3,402,810 to 3,405,314
SMc03287
SMc03288: SMc03288 - hypothetical protein, at 3,406,047 to 3,406,367
SMc03288
SMc03289: SMc03289 - hypothetical protein, at 3,406,801 to 3,406,983
SMc03289
Position (kb)
3406
3407 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3405.086 kb on - strand at 3405.143 kb on + strand at 3405.171 kb on + strand at 3405.171 kb on + strand at 3405.172 kb on - strand at 3405.200 kb on + strand at 3405.261 kb on + strand at 3405.395 kb on - strand at 3405.448 kb on - strand at 3405.458 kb on + strand at 3405.539 kb on + strand at 3405.539 kb on + strand at 3405.540 kb on - strand at 3405.543 kb on - strand at 3405.577 kb on + strand at 3405.584 kb on + strand at 3405.585 kb on - strand at 3405.588 kb on - strand at 3405.590 kb on - strand at 3405.590 kb on - strand at 3405.604 kb on - strand at 3405.691 kb on + strand at 3405.691 kb on + strand at 3405.704 kb on - strand at 3405.812 kb on - strand at 3405.874 kb on + strand at 3405.925 kb on + strand at 3405.925 kb on + strand at 3405.926 kb on - strand at 3405.963 kb on + strand at 3405.964 kb on - strand at 3405.995 kb on + strand at 3406.006 kb on + strand at 3406.185 kb on + strand, within SMc03288 at 3406.186 kb on - strand, within SMc03288 at 3406.293 kb on + strand, within SMc03288 at 3406.334 kb on - strand, within SMc03288 at 3406.460 kb on + strand at 3406.460 kb on + strand at 3406.461 kb on - strand at 3406.498 kb on + strand at 3406.524 kb on + strand at 3406.531 kb on + strand at 3406.531 kb on + strand at 3406.532 kb on - strand at 3406.572 kb on + strand at 3406.574 kb on + strand at 3406.577 kb on + strand at 3406.603 kb on + strand at 3406.745 kb on + strand at 3406.746 kb on - strand at 3406.746 kb on - strand at 3406.746 kb on - strand at 3406.746 kb on - strand at 3406.909 kb on + strand, within SMc03289 at 3406.909 kb on + strand, within SMc03289 at 3406.909 kb on + strand, within SMc03289 at 3406.934 kb on + strand, within SMc03289 at 3406.950 kb on + strand, within SMc03289 at 3407.062 kb on + strand at 3407.099 kb on - strand at 3407.188 kb on - strand at 3407.193 kb on + strand at 3407.193 kb on + strand at 3407.193 kb on + strand at 3407.193 kb on + strand at 3407.193 kb on + strand at 3407.194 kb on - strand at 3407.194 kb on - strand at 3407.194 kb on - strand at 3407.194 kb on - strand at 3407.231 kb on + strand at 3407.241 kb on + strand at 3407.314 kb on - strand at 3407.314 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,405,086 - -0.2 3,405,143 + -0.3 3,405,171 + -0.3 3,405,171 + +0.1 3,405,172 - +1.0 3,405,200 + +0.5 3,405,261 + -0.0 3,405,395 - -2.2 3,405,448 - -0.3 3,405,458 + -0.0 3,405,539 + +0.1 3,405,539 + -0.6 3,405,540 - -0.2 3,405,543 - -0.0 3,405,577 + +0.4 3,405,584 + -0.3 3,405,585 - -0.1 3,405,588 - -0.5 3,405,590 - -0.3 3,405,590 - -0.5 3,405,604 - -0.1 3,405,691 + -0.8 3,405,691 + -0.2 3,405,704 - -0.1 3,405,812 - -0.5 3,405,874 + -0.1 3,405,925 + -0.5 3,405,925 + -1.7 3,405,926 - +1.1 3,405,963 + -0.1 3,405,964 - -0.1 3,405,995 + +0.5 3,406,006 + -0.3 3,406,185 + SMc03288 0.43 +0.3 3,406,186 - SMc03288 0.43 +0.5 3,406,293 + SMc03288 0.77 +0.3 3,406,334 - SMc03288 0.89 +0.2 3,406,460 + -0.1 3,406,460 + -0.1 3,406,461 - -1.6 3,406,498 + -0.2 3,406,524 + -0.6 3,406,531 + -0.1 3,406,531 + -0.4 3,406,532 - +2.0 3,406,572 + +0.3 3,406,574 + -0.3 3,406,577 + -0.3 3,406,603 + +0.0 3,406,745 + -0.3 3,406,746 - -1.1 3,406,746 - +0.3 3,406,746 - +0.1 3,406,746 - +0.6 3,406,909 + SMc03289 0.59 -0.2 3,406,909 + SMc03289 0.59 -0.7 3,406,909 + SMc03289 0.59 +0.0 3,406,934 + SMc03289 0.73 +0.7 3,406,950 + SMc03289 0.81 +0.5 3,407,062 + +0.4 3,407,099 - +0.8 3,407,188 - -0.2 3,407,193 + -2.0 3,407,193 + -0.1 3,407,193 + -0.2 3,407,193 + -0.7 3,407,193 + -0.0 3,407,194 - +0.3 3,407,194 - +0.8 3,407,194 - -0.5 3,407,194 - +0.1 3,407,231 + +0.8 3,407,241 + -0.0 3,407,314 - +0.5 3,407,314 - -0.3
Or see this region's nucleotide sequence